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scn_reactorb_scaffold_8582_59

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 52947..53219

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer transmembrane protein TrbD n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GX43_CUPNN similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 90.0
  • Bit_score: 177
  • Evalue 3.10e-42
trbD; conjugal transfer transmembrane protein TrbD similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 90.0
  • Bit_score: 177
  • Evalue 8.70e-43
Conjugal transfer transmembrane protein TrbD {ECO:0000313|EMBL:AEI81913.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 90.0
  • Bit_score: 177
  • Evalue 4.30e-42

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Taxonomy

Cupriavidus necator → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGAACGGCTCAGACACCTTCGCGGCAGGGTTCGAGGTGCCTTTGCATCGGTCTTTGACCGAGCCGATCCTGATGGGGGGTGCGCCTCGCACCGTGGCGATCGCCAATGGCACGCTCGCCGCCGCTGTTGGGCTAGGCCTGCAACTGTGGATTCCCGGTCTGGCGCTCTGGATCGTCGGCCACTCGCTGGCGGTGTGGGGAGCACGCGTCGATCCACAGTTCATGCAGGTCTTCGCGCGGCACATCAAGCACCGGCCGCTGCTGGACGTGTGA
PROTEIN sequence
Length: 91
MNGSDTFAAGFEVPLHRSLTEPILMGGAPRTVAIANGTLAAAVGLGLQLWIPGLALWIVGHSLAVWGARVDPQFMQVFARHIKHRPLLDV*