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scn_reactorb_scaffold_8582_87

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(78837..79106)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbD n=1 Tax=Pseudomonas putida S12 RepID=V4GS23_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 183
  • Evalue 7.20e-44
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KGA23328.1}; TaxID=180957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. brasiliense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 183
  • Evalue 1.00e-43
conjugal transfer protein TrbD similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 89.0
  • Bit_score: 181
  • Evalue 5.90e-44

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Taxonomy

Pectobacterium carotovorum → Pectobacterium → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGAGCACGGCCACCGATCTTCCGGGCTTTGAAGTGCCGCTGCACCGCTCGCTGACCGAACCGATCCTGCTGGGCGGCGCGCCGCGCACCGTGGCGATTGCCAACGGCACGCTGGCCGCCGCCGTCGGGCTGGGCCTGCAACTGTGGATTCCCGGCGTAGTGCTGTGGATCGTCGGCCATTCGCTGGCGGTCTGGGGTGCGCGTGTCGATCCGCAGTTCATGCAGGTCTTCGCCCGGCACATCAAACACAAGCCACTGCTGGACGCATAG
PROTEIN sequence
Length: 90
MSTATDLPGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWIVGHSLAVWGARVDPQFMQVFARHIKHKPLLDA*