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scn_reactorb_scaffold_8582_88

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(79103..79489)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB2 component (Pilins) n=1 Tax=Congregibacter litoralis KT71 RepID=A4AAL3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 128.0
  • Bit_score: 240
  • Evalue 7.10e-61
conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 128.0
  • Bit_score: 240
  • Evalue 2.00e-61
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AJG14501.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 128.0
  • Bit_score: 240
  • Evalue 1.00e-60

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Taxonomy

Pseudomonas plecoglossicida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGACGCACGTTGATGCTTTCCGTCTTTCTGTAAACCTGCTTTCCCCGCTGCCCATGCTGGCGCGTTTGCACCGCCTGGCTCGACCCGCAGGACAAGGGCTGCTGCTCGCAGTGTTGATGCTGTTGCTGGCGGGCACGGCGCAGGCCGCCGGTTCCTCGATGCCGTGGGAAGGCCCGCTGCAATCCATCCTCGAATCCATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTGATCATCATCATCGCCACCGGCCTGGCGCTGGCCTTCGGCGATACCAGCGGCGGCTTTCGCAAGCTGATACAGATCGTCTTCGGCCTTTCCATCGCCTTCGCGGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGTGGGGCCGTCGTATGA
PROTEIN sequence
Length: 129
MTHVDAFRLSVNLLSPLPMLARLHRLARPAGQGLLLAVLMLLLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*