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SCN18_14_9_16_R1_B_scaffold_3286

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3286_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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164..1051
DNA (888bp) protein (296aa)
Quinone oxidoreductase 2 {ECO:0000313|EMBL:EYR81769.1}; EC=1.6.5.2 {ECO:0000313|EMBL:EYR81769.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Quinone oxidoreductase 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZW3_9RHIZ
putative nucleoside-diphosphate-sugar epimerase
SCN18_14_9_16_R1_B_scaffold_3286_2
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1094..1846)
DNA (753bp) protein (251aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pdxJ; pyridoxine 5'-phosphate synthase PdxJ (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4J0_9RHIZ
SCN18_14_9_16_R1_B_scaffold_3286_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2094..3218
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVL6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81767.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3286_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3528..4208
DNA (681bp) protein (227aa)
Putative nodulation protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3Y2_9RHIZ
Putative nodulation protein {ECO:0000313|EMBL:EYR81766.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nodulation protein
SCN18_14_9_16_R1_B_scaffold_3286_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4249..5376)
DNA (1128bp) protein (376aa)
Exodeoxyribonuclease V protein subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ82_9RHIZ
Exodeoxyribonuclease V protein subunit alpha {ECO:0000313|EMBL:EYR81765.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
exodeoxyribonuclease V
SCN18_14_9_16_R1_B_scaffold_3286_6
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5695..6555
DNA (861bp) protein (287aa)
Protein AbrB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWB2_9RHIZ
Protein AbrB {ECO:0000313|EMBL:EYR81764.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative ammonia monooxygenase
SCN18_14_9_16_R1_B_scaffold_3286_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6552..7145)
DNA (594bp) protein (198aa)
Putative transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWA7_9RHIZ
Putative transmembrane protein {ECO:0000313|EMBL:EYR81759.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lysine exporter protein LysE/YggA
SCN18_14_9_16_R1_B_scaffold_3286_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7266..8111
DNA (846bp) protein (282aa)
Putative aldo-keto reductase family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSW2_9RHIZ
Putative aldo-keto reductase family protein {ECO:0000313|EMBL:EYR81758.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative aldo-keto reductase family protein
SCN18_14_9_16_R1_B_scaffold_3286_9
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8296..8868)
DNA (573bp) protein (191aa)
Putative acetolactate synthase small subunit {ECO:0000313|EMBL:EYR81757.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EYR81757.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ilvH; acetolactate synthase 3 small subunit (EC:2.2.1.6)
Putative acetolactate synthase small subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQB5_9RHIZ
SCN18_14_9_16_R1_B_scaffold_3286_10
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8886..10664)
DNA (1779bp) protein (593aa)
Acetolactate synthase isozyme 3 large subunit {ECO:0000313|EMBL:EYR81756.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EYR81756.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ilvI; acetolactate synthase isozyme 3 large subunit IlvI (EC:2.2.1.6)
Acetolactate synthase isozyme 3 large subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7J0_9RHIZ
SCN18_14_9_16_R1_B_scaffold_3286_11
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11008..13071
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUI2_9RHIZ
Putative ATPase {ECO:0000313|EMBL:EYR81755.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
P-loop ATPase
SCN18_14_9_16_R1_B_scaffold_3286_12
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13049..13513)
DNA (465bp) protein (155aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tRNA dimethylallyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX87_9RHIZ
tRNA delta(2)-isopentenylpyrophosphate transferase
Displaying 12 items

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