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SCN18_14_9_16_R1_B_scaffold_3296

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3296_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1787)
DNA (1785bp) protein (595aa)
Protein translocase subunit SecA n=1 Tax=Rhizobium sp. (strain NGR234) RepID=SECA_RHISN
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
secA; preprotein translocase subunit SecA
SCN18_14_9_16_R1_B_scaffold_3296_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1914..2927
DNA (1014bp) protein (338aa)
Foldase protein PrsA 2 {ECO:0000313|EMBL:EYR79745.1}; EC=5.2.1.8 {ECO:0000313|EMBL:EYR79745.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Foldase protein PrsA 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7Q4_9RHIZ
PpiC-type peptidyl-prolyl cis-trans isomerase
SCN18_14_9_16_R1_B_scaffold_3296_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2955..4142)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3E0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87601.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCN18_14_9_16_R1_B_scaffold_3296_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4284..5042
DNA (759bp) protein (253aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EYR79743.1}; EC=2.3.1.- {ECO:0000313|EMBL:EYR79743.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Acetyltransferase, GNAT family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT28_9RHIZ
acetyltransferase
SCN18_14_9_16_R1_B_scaffold_3296_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5039..5461
DNA (423bp) protein (141aa)
Mutator protein MutT {ECO:0000313|EMBL:EYR79742.1}; EC=3.6.1.- {ECO:0000313|EMBL:EYR79742.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
5-methyl-dCTP pyrophosphohydrolase (EC:3.6.1.-)
Mutator protein MutT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXN2_9RHIZ
SCN18_14_9_16_R1_B_scaffold_3296_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5572..5892
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRG2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79741.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3296_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5940..6113
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Liberibacter asiaticus RepID=C6XFQ2_LIBAP
hypothetical protein
Flp/Fap pilin protein {ECO:0000313|EMBL:ETI59652.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
SCN18_14_9_16_R1_B_scaffold_3296_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6117..6986)
DNA (870bp) protein (290aa)
Malonyl-[acyl-carrier protein] O-methyltransferase BioC {ECO:0000313|EMBL:EYR79739.1}; EC=2.1.1.197 {ECO:0000313|EMBL:EYR79739.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Malonyl-[acyl-carrier protein] O-methyltransferase BioC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETC0_9RHIZ
SAM-dependent methyltransferase protein
SCN18_14_9_16_R1_B_scaffold_3296_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7048..7839
DNA (792bp) protein (264aa)
Putative amidophosphoribosyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVX3_9RHIZ
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:EYR79738.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphoribosyltransferase protein
SCN18_14_9_16_R1_B_scaffold_3296_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7875..8129
DNA (255bp) protein (85aa)
Glutaredoxin 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0G6_9RHIZ
Glutaredoxin 3 {ECO:0000313|EMBL:EYR79737.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
grxC; glutaredoxin
SCN18_14_9_16_R1_B_scaffold_3296_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8141..8998
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRG7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79736.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCN18_14_9_16_R1_B_scaffold_3296_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8995..9423
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBK4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79735.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3296_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9423..10001
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETC5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79734.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3296_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10002..10751)
DNA (750bp) protein (250aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64 2.1.1.222)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVX7_9RHIZ
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_3296_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11196..11945
DNA (750bp) protein (250aa)
Serine/threonine specific protein phosphatase protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRH8_9RHIZ
Serine/threonine specific protein phosphatase protein {ECO:0000313|EMBL:EYR79726.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
apaH; Bis(5'nucleosyl)-tetraphosphatase, ApaH
SCN18_14_9_16_R1_B_scaffold_3296_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11949..12143)
DNA (195bp) protein (65aa)
Mannose-1-phosphate guanylyltransferase NoeJ {ECO:0000313|EMBL:EYR79725.1}; EC=2.7.7.13 {ECO:0000313|EMBL:EYR79725.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Mannose-1-phosphate guanylyltransferase NoeJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBL3_9RHIZ
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Displaying 16 items

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