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SCN18_14_9_16_R1_B_scaffold_3320

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3320_1
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..335
DNA (333bp) protein (111aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTG8_9RHIZ
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR77855.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC-type sugar transport system, permease component
SCN18_14_9_16_R1_B_scaffold_3320_2
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

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332..1159
DNA (828bp) protein (276aa)
sugar/sn-glycerol-3-phosphate ABC transporter permease UgpE n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026286C6
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR77854.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpE
SCN18_14_9_16_R1_B_scaffold_3320_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1186..2271
DNA (1086bp) protein (362aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC 2 {ECO:0000313|EMBL:EYR77853.1}; EC=3.6.3.20 {ECO:0000313|EMBL:EYR77853.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sn-glycerol-3-phosphate import ATP-binding protein UgpC 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYI1_9RHIZ
ABC transporter ATPase
SCN18_14_9_16_R1_B_scaffold_3320_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2330..3952)
DNA (1623bp) protein (541aa)
peptide ABC transporter nucleotide binding/ATPase protein (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00036D6305
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJF71182.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
SCN18_14_9_16_R1_B_scaffold_3320_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3981..4328)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6Y0Y7_RHIRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHH02907.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
SCN18_14_9_16_R1_B_scaffold_3320_6
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4344..5666)
DNA (1323bp) protein (441aa)
FAD dependent oxidoreductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A303_STAND
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADH87721.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCN18_14_9_16_R1_B_scaffold_3320_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5671..6552)
DNA (882bp) protein (294aa)
Oligopeptide ABC transporter, membrane spanning protein n=2 Tax=Agrobacterium RepID=F0L9X0_AGRSH
peptide/nickel transport system permease protein
Oligopeptide ABC transporter, membrane spanning protein {ECO:0000313|EMBL:ADY66162.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
SCN18_14_9_16_R1_B_scaffold_3320_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6565..7515)
DNA (951bp) protein (317aa)
ABC transporter, membrane spanning protein (Oligopeptide) n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CEL2_AGRT5
Diguanylate cyclase {ECO:0000313|EMBL:KGE02179.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
oligopeptide ABC transporter permease
SCN18_14_9_16_R1_B_scaffold_3320_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7651..9297)
DNA (1647bp) protein (549aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. AP16 RepID=J2KUT4_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGE02178.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
oligopeptide ABC transporter
SCN18_14_9_16_R1_B_scaffold_3320_10
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9363..9674)
DNA (312bp) protein (104aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AF1_MESSB
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABG65624.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying 10 items

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