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SCN18_14_9_16_R1_B_scaffold_3428

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3428_1
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..246
DNA (246bp) protein (82aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
N-acetylglucosamine-6-phosphate deacetylase NagA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUW4_9RHIZ
N-acetylglucosamine-6-phosphate deacetylase
SCN18_14_9_16_R1_B_scaffold_3428_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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334..1389
DNA (1056bp) protein (352aa)
Putative dipeptidase {ECO:0000313|EMBL:EYR77777.1}; EC=3.4.13.19 {ECO:0000313|EMBL:EYR77777.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative dipeptidase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDB7_9RHIZ
putative dipeptidase
SCN18_14_9_16_R1_B_scaffold_3428_3
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1411..2157
DNA (747bp) protein (249aa)
Copper homeostasis protein CutC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT72_9RHIZ
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
uncharacterized protein involved in copper resistance
SCN18_14_9_16_R1_B_scaffold_3428_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2221..2721
DNA (501bp) protein (167aa)
Putative CreA protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D289_9RHIZ
Putative CreA protein {ECO:0000313|EMBL:EYR77775.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
CreA family protein
SCN18_14_9_16_R1_B_scaffold_3428_5
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2773..3126)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QES5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59516.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3428_6
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3290..3754)
DNA (465bp) protein (155aa)
Chemotaxis protein CheW n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXM6_9RHIZ
Chemotaxis protein CheW {ECO:0000313|EMBL:EYR77774.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
chemotaxis protein
SCN18_14_9_16_R1_B_scaffold_3428_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4019..4177
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUW1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77773.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_3428_8
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4303..4902
DNA (600bp) protein (200aa)
Electron transport protein SCO1/SenC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDB2_9RHIZ
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EYR77772.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
senC; probabable SenC
SCN18_14_9_16_R1_B_scaffold_3428_9
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4981..5862
DNA (882bp) protein (294aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ribosomal protein L11 methyltransferase PrmA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT69_9RHIZ
prmA; 50S ribosomal protein L11 methyltransferase
SCN18_14_9_16_R1_B_scaffold_3428_10
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6308..7621
DNA (1314bp) protein (438aa)
Aminopeptidase P-like protein {ECO:0000313|EMBL:EYR77769.1}; EC=3.4.11.9 {ECO:0000313|EMBL:EYR77769.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
X-Pro aminopeptidase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037750A9
aminopeptidase P-like
Displaying 10 items

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