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SCN18_14_9_16_R1_B_scaffold_3525

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3525_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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388..696
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC78_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83856.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3525_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

784..1341
DNA (558bp) protein (186aa)
Phage prohead protease, HK97 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWS8_9RHIZ
Prohead peptidase {ECO:0000313|EMBL:EYR83855.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phage prohead protease, HK97 family
SCN18_14_9_16_R1_B_scaffold_3525_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1357..3060
DNA (1704bp) protein (568aa)
capsid protein n=1 Tax=Rhizobium giardinii RepID=UPI0003604AC0
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EYR83854.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phage major capsid protein, HK97 family
SCN18_14_9_16_R1_B_scaffold_3525_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3005..3442
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003601E18
Phage protein PhiE125 gp8 family {ECO:0000313|EMBL:EYR81164.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3525_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3442..3774
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000374735E
Phage head-tail adaptor, putative, SPP1 family {ECO:0000313|EMBL:EYR81165.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
head-tail adaptor protein
SCN18_14_9_16_R1_B_scaffold_3525_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3771..4178
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEI6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81166.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Gene transfer agent (GTA) like protein
SCN18_14_9_16_R1_B_scaffold_3525_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4206..4613
DNA (408bp) protein (136aa)
Phage major tail protein, TP901-1 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGP1_9RHIZ
Phage major tail protein, TP901-1 family {ECO:0000313|EMBL:EYR81167.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tail protein
SCN18_14_9_16_R1_B_scaffold_3525_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4613..4969
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 PF8_9RHIZ">RepID=J3BPF8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81168.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3525_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5056..5169
DNA (114bp) protein (38aa)
Phage protein DUF2376 {ECO:0000313|EMBL:EYR81169.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_3525_10
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5173..5712
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCT8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81170.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3525_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6036..6671
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXD9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81171.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
TIGR02217 family protein
SCN18_14_9_16_R1_B_scaffold_3525_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6668..7444
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EF93_9RHIZ
Phage protein {ECO:0000313|EMBL:EYR81172.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Beta tubulin, autoregulation binding site
Displaying 12 items

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