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SCN18_14_9_16_R1_B_scaffold_3609

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3609_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..105)
DNA (105bp) protein (35aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Rhizobium meliloti RepID=UPI00037AACD5
ABC-type branched-chain amino acid transport system, permease component
Putative branched chain amino acid transport system permease ABC transporter {ECO:0000313|EMBL:CAC47166.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCN18_14_9_16_R1_B_scaffold_3609_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(119..1009)
DNA (891bp) protein (297aa)
Putative high-affinity branched-chain amino acid transport permease ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETE7_9RHIZ
Putative high-affinity branched-chain amino acid transport permease ABC transporter {ECO:0000313|EMBL:EYR78323.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
inner-membrane translocator
SCN18_14_9_16_R1_B_scaffold_3609_3
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

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comp(1013..1720)
DNA (708bp) protein (236aa)
Monosaccharide-transporting ATPase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FT92_RHIML
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EHK79780.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
livF3; high-affinity branched-chain amino acid transport ATP-binding protein LivF
SCN18_14_9_16_R1_B_scaffold_3609_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1713..2465)
DNA (753bp) protein (251aa)
Monosaccharide-transporting ATPase n=7 Tax=Rhizobium meliloti RepID=F6BR19_SINMB
ABC-type branched-chain amino acid transport systems, ATPase component
Putative high-affinity branched-chain amino acid transport ATP-binding ABC transporter {ECO:0000313|EMBL:CAC47163.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCN18_14_9_16_R1_B_scaffold_3609_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2500..3669)
DNA (1170bp) protein (390aa)
Extracellular ligand-binding receptor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0L4_9RHIZ
ABC-type branched-chain amino acid transport systemperiplasmic component {ECO:0000313|EMBL:EYR78320.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
extracellular ligand-binding receptor
SCN18_14_9_16_R1_B_scaffold_3609_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3790..4440)
DNA (651bp) protein (217aa)
Isochorismatase hydrolase n=6 Tax=Rhizobium meliloti RepID=F6BR17_SINMB
Amidases related to nicotinamidase
Putative isochorismatase family protein {ECO:0000313|EMBL:CAC47161.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCN18_14_9_16_R1_B_scaffold_3609_7
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4430..5245)
DNA (816bp) protein (272aa)
N-formylglutamate amidohydrolase n=1 Tax=Rhizobium meliloti RepID=UPI00036CB444
hypothetical protein
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EHK79776.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCN18_14_9_16_R1_B_scaffold_3609_8
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5405..6307
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBN0_9RHIZ
Transcriptional regulator RpiR family {ECO:0000313|EMBL:EYR78317.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
RpiR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_3609_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6297..7313
DNA (1017bp) protein (339aa)
Glutamine synthetase GlnA {ECO:0000313|EMBL:EYR78316.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EYR78316.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Glutamine synthetase GlnA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRJ6_9RHIZ
glutamine synthetase catalytic region
Displaying 9 items

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