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SCN18_14_9_16_R1_B_scaffold_3642

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3642_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1310
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VQ86_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC74973.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3642_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1361..2356
DNA (996bp) protein (332aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KBR9_RHILT
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EJC74974.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
NMT1/THI5 like domain-containing protein
SCN18_14_9_16_R1_B_scaffold_3642_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2406..3134
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A0U4_RHILW
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACI58228.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCN18_14_9_16_R1_B_scaffold_3642_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3238..4041
DNA (804bp) protein (268aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VNS5_RHILT
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJC74976.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
binding-protein-dependent transport systems inner membrane component
SCN18_14_9_16_R1_B_scaffold_3642_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4041..4817
DNA (777bp) protein (259aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0BX66_RHILT
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EJC74977.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
ABC transporter
SCN18_14_9_16_R1_B_scaffold_3642_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4814..6394
DNA (1581bp) protein (527aa)
Gamma-glutamyltransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VQ91_RHILT
Gamma-glutamyltransferase {ECO:0000313|EMBL:EJC74978.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
gamma-glutamyltranspeptidase
SCN18_14_9_16_R1_B_scaffold_3642_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6398..7264
DNA (867bp) protein (289aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KBS6_RHILT
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EJC74979.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
Putative D-amino-acid dehydrogenase (DadA)
SCN18_14_9_16_R1_B_scaffold_3642_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7276..7686
DNA (411bp) protein (137aa)
D-amino-acid dehydrogenase (EC:1.4.99.1)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KBS6_RHILT
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EJC74979.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
SCN18_14_9_16_R1_B_scaffold_3642_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7745..8989
DNA (1245bp) protein (415aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C7I4_RHILT
SCN18_14_9_16_R1_B_scaffold_3642_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9165..9428
DNA (264bp) protein (88aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D914_9RHIZ
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:EYR79750.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3642_11
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9503..11146
DNA (1644bp) protein (548aa)
Acetyl-CoA synthetase protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4N9_9RHIZ
Acetyl-CoA synthetase protein {ECO:0000313|EMBL:EYR79749.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
acetyl-CoA synthetase
SCN18_14_9_16_R1_B_scaffold_3642_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11206..12477)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F0C9_9RHIZ
Acetytransferase {ECO:0000313|EMBL:EYR79748.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3642_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12467..13894)
DNA (1428bp) protein (476aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CK84_9RHIZ
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:EYR79747.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
probabable polysaccharide biosynthesis related protein
SCN18_14_9_16_R1_B_scaffold_3642_14
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14078..14935)
DNA (858bp) protein (286aa)
preprotein translocase subunit SecA n=1 Tax=Hoeflea sp. 108 RepID=UPI00036ECFAD
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
secA; protein translocase subunit SecA
Displaying 14 items

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