ggKbase home page

SCN18_14_9_16_R1_B_scaffold_3918

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3918_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1051)
DNA (1050bp) protein (350aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcription-repair coupling factor n=1 Tax=Rhizobium mongolense RepID=UPI0003B62E2C
mfd; transcription-repair coupling factor
SCN18_14_9_16_R1_B_scaffold_3918_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1048..1356)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHY8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79931.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3918_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1463..3568
DNA (2106bp) protein (702aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EYR79932.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EYR79932.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ATP-dependent DNA helicase RecG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY37_9RHIZ
recG; ATP-dependent DNA helicase RecG
SCN18_14_9_16_R1_B_scaffold_3918_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3648..3863
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6W7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79933.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_3918_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3906..4613)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2E7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79934.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3918_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4651..5145)
DNA (495bp) protein (165aa)
Acetyltransferase {ECO:0000313|EMBL:EYR79935.1}; EC=2.3.1.- {ECO:0000313|EMBL:EYR79935.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GNAT family acetyltransferase (EC:2.3.1.-)
Acetyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYK5_9RHIZ
SCN18_14_9_16_R1_B_scaffold_3918_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5142..6683)
DNA (1542bp) protein (514aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHY2_9RHIZ
glmS2; isomerizing glucosamine--fructose-6-phosphate aminotransferase
SCN18_14_9_16_R1_B_scaffold_3918_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7056..7436)
DNA (381bp) protein (127aa)
Bifunctional protein GlmU n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY31_9RHIZ
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
Displaying 8 items

View Taxonomy