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SCN18_14_9_16_R1_B_scaffold_6361

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_6361_1
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1341)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBV4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83461.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_6361_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1352..1840)
DNA (489bp) protein (163aa)
Tripartite tricarboxylate transporter TctB family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETL2_9RHIZ
Tripartite tricarboxylate transporter TctB family {ECO:0000313|EMBL:EYR83462.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
C4-dicarboxylate ABC transporter
SCN18_14_9_16_R1_B_scaffold_6361_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1837..2781)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW90_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83463.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
TRAP-T family transporter, periplasmic binding protein
SCN18_14_9_16_R1_B_scaffold_6361_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2992..4059)
DNA (1068bp) protein (356aa)
Putative iron ABC transporter, substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0T9_9RHIZ
Putative iron ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EYR83464.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative periplasmic iron-binding signal peptide protein
SCN18_14_9_16_R1_B_scaffold_6361_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4540..4875
DNA (336bp) protein (112aa)
Transcriptional regulatory protein QseB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRS3_9RHIZ
Transcriptional regulatory protein QseB {ECO:0000313|EMBL:EYR83465.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
two-component response regulator protein
SCN18_14_9_16_R1_B_scaffold_6361_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4872..6266
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
histidine kinase n=1 Tax=Rhizobium giardinii RepID=UPI00036D7748
two-component sensor histidine kinase
SCN18_14_9_16_R1_B_scaffold_6361_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6280..6615)
DNA (336bp) protein (112aa)
Putative LysE type translocator n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A3K7_RHIFH
putative LysE type translocator
Putative LysE type translocator {ECO:0000313|EMBL:AHK42815.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Displaying 7 items

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