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SCN18_14_9_16_R1_B_scaffold_6422

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_6422_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..711
DNA (711bp) protein (237aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Sensor histidine kinase RegB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXA6_9RHIZ
two-component sensor histidine kinase protein
SCN18_14_9_16_R1_B_scaffold_6422_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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788..1357
DNA (570bp) protein (190aa)
Acid tolerance regulatory protein ActR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1X2_9RHIZ
Acid tolerance regulatory protein ActR {ECO:0000313|EMBL:EYR83748.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
actR-1; acid tolerance response regulator ActR -1
SCN18_14_9_16_R1_B_scaffold_6422_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1358..1888)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSW8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83747.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_6422_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2334..2996
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4B7_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:EYR83746.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_6422_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3283..3855
DNA (573bp) protein (191aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hslV; ATP-dependent protease peptidase subunit (EC:3.4.25.-)
ATP-dependent protease subunit HslV n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXZ0_9RHIZ
SCN18_14_9_16_R1_B_scaffold_6422_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3852..4313
DNA (462bp) protein (154aa)
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:EYR83739.1}; EC=2.3.1.82 {ECO:0000313|EMBL:EYR83739.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
N-acetyltransferase (EC:2.3.1.82)
GCN5-like N-acetyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHU6_9RHIZ
SCN18_14_9_16_R1_B_scaffold_6422_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4328..4414
DNA (87bp) protein (29aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYI1_9RHIZ
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hslU; ATP-dependent hsl protease ATP-binding subunit HslU
Displaying 7 items

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