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SCN18_14_9_16_R1_B_scaffold_1626

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1626_1
scnpilot_dereplicated_Plasmid_Rhizobiales_1, scnpilot_dereplicated_Plasmid_Rhizobiales_1, scnpilot_dereplicated_Plasmid_Rhizobiales_1, scnpilot_dereplicated_Plasmid_Rhizobiales_1, scnpilot_dereplicated_Plasmid_Rhizobiales_1, Plasmid-like

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comp(1..318)
DNA (318bp) protein (106aa)
Streptomycin 3''-kinase AphE {ECO:0000313|EMBL:EYR79134.1}; EC=2.7.1.87 {ECO:0000313|EMBL:EYR79134.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Streptomycin 3''-kinase AphE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZX1_9RHIZ
aminoglycoside phosphotransferase
SCN18_14_9_16_R1_B_scaffold_1626_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(338..1012)
DNA (675bp) protein (225aa)
Phosphoglycolate phosphatase Gph {ECO:0000313|EMBL:EYR79135.1}; EC=3.1.3.18 {ECO:0000313|EMBL:EYR79135.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phosphoglycolate phosphatase Gph n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQV0_9RHIZ
phosphoglycolate phosphatase
SCN18_14_9_16_R1_B_scaffold_1626_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1203..1901
DNA (699bp) protein (233aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAZ2_9RHIZ
SCN18_14_9_16_R1_B_scaffold_1626_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1920..2459
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EST7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79137.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1626_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2559..3419
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVE1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79138.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1626_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3456..3746)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZX9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79139.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1626_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4045..5433
DNA (1389bp) protein (463aa)
Glutathione reductase Gor {ECO:0000313|EMBL:EYR79140.1}; EC=1.8.1.7 {ECO:0000313|EMBL:EYR79140.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gor; glutathione reductase (EC:1.8.1.7)
Glutathione reductase Gor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQV7_9RHIZ
SCN18_14_9_16_R1_B_scaffold_1626_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5578..6951
DNA (1374bp) protein (458aa)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003740B65
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KDP74551.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
phospho-2-dehydro-3-deoxyheptonate aldolase
SCN18_14_9_16_R1_B_scaffold_1626_9
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7075..7470
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003622FE2
Aldehyde-activating protein {ECO:0000313|EMBL:KDP74550.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
glutathione-dependent formaldehyde-activating protein
SCN18_14_9_16_R1_B_scaffold_1626_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7486..9195)
DNA (1710bp) protein (570aa)
Putative membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5S7_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EYR80085.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1626_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9197..9619)
DNA (423bp) protein (141aa)
signal peptide protein n=1 Tax=Rhizobium meliloti RepID=UPI0003626411
Uncharacterized protein {ECO:0000313|EMBL:EYR80084.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
signal peptide protein
SCN18_14_9_16_R1_B_scaffold_1626_12
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9763..10293)
DNA (531bp) protein (177aa)
Putative membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D106_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EYR80083.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1626_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10350..12278)
DNA (1929bp) protein (643aa)
Putative cyclic beta-1,2-glucan modification protein CgmA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5L6_9RHIZ
Putative cyclic beta-1,2-glucan modification protein CgmA {ECO:0000313|EMBL:EYR80082.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cyclic beta-1,2-glucan modification protein
SCN18_14_9_16_R1_B_scaffold_1626_14
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12572..13630
DNA (1059bp) protein (353aa)
Glutamine-dependent NAD(+) synthetase NadE {ECO:0000313|EMBL:EYR80081.1}; EC=6.3.5.1 {ECO:0000313|EMBL:EYR80081.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Glutamine-dependent NAD(+) synthetase NadE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWQ6_9RHIZ
glutamine-dependent NAD(+) synthetase (NAD(+) synthase)
Displaying 14 items

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