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SCN18_14_9_16_R1_B_scaffold_1731

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1731_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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164..901
DNA (738bp) protein (246aa)
Hemaglutinin protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HNT1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83168.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
peptidoglycan-binding protein
SCN18_14_9_16_R1_B_scaffold_1731_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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871..3960
DNA (3090bp) protein (1030aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036A3F28
Uncharacterized protein {ECO:0000313|EMBL:EYR83168.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein contains peptidoglycan binding domain
SCN18_14_9_16_R1_B_scaffold_1731_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4404..5330
DNA (927bp) protein (309aa)
Putative permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIR4_9RHIZ
Putative permease {ECO:0000313|EMBL:EYR83167.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
permease
SCN18_14_9_16_R1_B_scaffold_1731_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5327..6121
DNA (795bp) protein (265aa)
Putative transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYT1_9RHIZ
Putative transmembrane protein {ECO:0000313|EMBL:EYR83166.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane protein
SCN18_14_9_16_R1_B_scaffold_1731_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6126..6566)
DNA (441bp) protein (147aa)
Universal stress protein family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7L3_9RHIZ
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
universal stress protein
SCN18_14_9_16_R1_B_scaffold_1731_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6644..7147)
DNA (504bp) protein (168aa)
Transcriptional regulator, HxlR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D348_9RHIZ
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EYR83164.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
HxlR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_1731_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7343..8569
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QB88_9RHIZ
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDI10956.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCN18_14_9_16_R1_B_scaffold_1731_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8761..9486)
DNA (726bp) protein (242aa)
Phosphoesterase protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZ53_9RHIZ
Phosphoesterase protein {ECO:0000313|EMBL:EYR83163.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphoesterase
SCN18_14_9_16_R1_B_scaffold_1731_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9503..12028)
DNA (2526bp) protein (842aa)
ATP-dependent RNA/DNA helicase protein Lhr n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIQ9_9RHIZ
ATP-dependent RNA/DNA helicase protein Lhr {ECO:0000313|EMBL:EYR83162.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DEAD/DEAH box type DNA/RNA helicase protein
SCN18_14_9_16_R1_B_scaffold_1731_10
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12120..13061)
DNA (942bp) protein (314aa)
Methyltransferase type 12 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7K7_9RHIZ
Methyltransferase type 12 {ECO:0000313|EMBL:EYR83160.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1731_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13205..13471
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D342_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83159.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein, putative transmembrane protein
SCN18_14_9_16_R1_B_scaffold_1731_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13474..13725
DNA (252bp) protein (84aa)
SCP-like extracellular n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZ49_9RHIZ
SCP-like extracellular {ECO:0000313|EMBL:EYR83158.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1731_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13722..13925
DNA (204bp) protein (68aa)
SCP-like extracellular n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZ49_9RHIZ
SCP-like extracellular {ECO:0000313|EMBL:EYR83158.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1731_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14048..14146
DNA (99bp) protein (33aa)
DNA-damage-inducible protein F n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIQ5_9RHIZ
DNA-damage-inducible protein F {ECO:0000313|EMBL:EYR83157.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 14 items

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