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SCN18_14_9_16_R1_B_scaffold_7061

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_7061_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..125)
DNA (123bp) protein (41aa)
D-aminopeptidase {ECO:0000313|EMBL:EYR79241.1}; EC=3.4.11.19 {ECO:0000313|EMBL:EYR79241.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
D-aminopeptidase (EC:3.4.11.19)
aminopeptidase n=1 Tax=Rhizobium meliloti RepID=UPI000378FF75
SCN18_14_9_16_R1_B_scaffold_7061_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(152..979)
DNA (828bp) protein (276aa)
Branched-chain amino acid aminotransferase (EC:2.6.1.21)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AAK64705.1}; EC=2.6.1.21 {ECO:0000313|EMBL:AAK64705.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
Branched-chain amino acid aminotransferase n=2 Tax=Rhizobium meliloti RepID=M4MGB6_RHIML
SCN18_14_9_16_R1_B_scaffold_7061_3
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1321..1836
DNA (516bp) protein (172aa)
Transcription regulator, Lrp/AsnC family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQX4_9RHIZ
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:EYR78546.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcription regulator, Lrp/AsnC family
SCN18_14_9_16_R1_B_scaffold_7061_4
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1840..3384
DNA (1545bp) protein (515aa)
Hydantoin utilization protein A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C829_9RHIZ
Hydantoin utilization protein A {ECO:0000313|EMBL:EYR78545.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hydantoinase/oxoprolinase family protein
SCN18_14_9_16_R1_B_scaffold_7061_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3381..4502
DNA (1122bp) protein (374aa)
Putative hydantoinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNX2_9RHIZ
Putative hydantoinase {ECO:0000313|EMBL:EYR78544.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative hydantoinase
SCN18_14_9_16_R1_B_scaffold_7061_6
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4537..4917
DNA (381bp) protein (127aa)
Putative D,D-dipeptide-binding periplasmic protein DdpA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXZ9_9RHIZ
Putative D,D-dipeptide-binding periplasmic protein DdpA {ECO:0000313|EMBL:EYR78543.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
dppA; periplasmic dipeptide ABC transport protein precursor DppA
Displaying 6 items

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