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SCN18_14_9_16_R1_B_scaffold_5019

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_5019_1
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(65..1645)
DNA (1581bp) protein (527aa)
Peptide chain release factor 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D044_9RHIZ
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
prfC; peptide chain release factor 3
SCN18_14_9_16_R1_B_scaffold_5019_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1739..2212
DNA (474bp) protein (158aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Rhizobium giardinii RepID=UPI0003695638
SCN18_14_9_16_R1_B_scaffold_5019_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2217..3101
DNA (885bp) protein (295aa)
Putative acetyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4I0_9RHIZ
Putative acetyltransferase {ECO:0000313|EMBL:EYR83324.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_5019_4
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3102..3734)
DNA (633bp) protein (211aa)
Lysine exporter LysE/YggA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F085_9RHIZ
Lysine exporter LysE/YggA {ECO:0000313|EMBL:EYR83325.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lysine transporter LysE
SCN18_14_9_16_R1_B_scaffold_5019_5
unknown

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4249..4440
DNA (192bp) protein (64aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_5019_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4590..5558
DNA (969bp) protein (323aa)
O-acetylserine sulfhydrylase CysK {ECO:0000313|EMBL:EYR83327.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EYR83327.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cysK; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) (EC:2.5.1.47)
O-acetylserine sulfhydrylase CysK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D042_9RHIZ
Displaying 6 items

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