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SCN18_14_9_16_R1_B_scaffold_5112

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_5112_1
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..356)
DNA (354bp) protein (118aa)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCZ5_9RHIZ
HAD-superfamily class IIA hydrolase, TIGR01459 {ECO:0000313|EMBL:EYR80133.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
HAD-superfamily hydrolase, subfamily IIA
SCN18_14_9_16_R1_B_scaffold_5112_2
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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676..972
DNA (297bp) protein (99aa)
10 kDa chaperonin n=9 Tax=Rhizobium RepID=CH10_RHILW
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
groES; co-chaperonin GroES
SCN18_14_9_16_R1_B_scaffold_5112_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1027..2664
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC70_9RHIZ
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
groEL; chaperonin GroEL
SCN18_14_9_16_R1_B_scaffold_5112_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3143..3589
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZC8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80130.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_5112_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3623..5473)
DNA (1851bp) protein (617aa)
Putative diguanylate cyclase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ99_9RHIZ
Putative diguanylate cyclase {ECO:0000313|EMBL:EYR80129.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Signaling protein
Displaying 5 items

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