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SCN18_14_9_16_R1_B_scaffold_5256

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_5256_1
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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166..633
DNA (468bp) protein (156aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C210_9RHIZ
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EYR79356.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AsnC family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_5256_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(650..1324)
DNA (675bp) protein (225aa)
Transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D053_9RHIZ
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EYR78358.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GntR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_5256_3
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1583..2968
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EX58_9RHIZ
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EYR78357.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
class III aminotransferase
SCN18_14_9_16_R1_B_scaffold_5256_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3030..4070
DNA (1041bp) protein (347aa)
Putative tartrate dehydrogenase/decarboxylase TtuC {ECO:0000313|EMBL:EYR78356.1}; EC=1.1.1.83 {ECO:0000313|EMBL:EYR78356.1};; EC=1.1.1.93 {ECO:0000313|EMBL:EYR78356.1};; EC=4.1.1.73 {ECO:0000313|EMBL:EYR78356.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tartrate dehydrogenase (EC:1.1.1.93 4.1.1.73)
Putative tartrate dehydrogenase/decarboxylase TtuC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFU9_9RHIZ
SCN18_14_9_16_R1_B_scaffold_5256_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4077..5126)
DNA (1050bp) protein (350aa)
L-sulfolactate dehydrogenase ComC {ECO:0000313|EMBL:EYR78355.1}; EC=1.1.1.337 {ECO:0000313|EMBL:EYR78355.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
L-sulfolactate dehydrogenase ComC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVV3_9RHIZ
malate/L-lactate dehydrogenase
SCN18_14_9_16_R1_B_scaffold_5256_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5161..5340)
DNA (180bp) protein (60aa)
aapP; general L-amino acid ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter n=1 Tax=Martelella mediterranea RepID=UPI00036FF894
ABC transporter {ECO:0000313|EMBL:EJT05746.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
Displaying 6 items

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