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SCN18_14_9_16_R1_B_scaffold_5263

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_5263_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..549
DNA (549bp) protein (183aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000377B685
ribonucleotide-diphosphate reductase subunit alpha
SCN18_14_9_16_R1_B_scaffold_5263_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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563..1552
DNA (990bp) protein (330aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ribonucleoside-diphosphate reductase beta chain (EC:1.17.4.1)
ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003793D05
SCN18_14_9_16_R1_B_scaffold_5263_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1558..2196)
DNA (639bp) protein (213aa)
Phosphotransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1N5_9RHIZ
Phosphotransferase {ECO:0000313|EMBL:EYR82545.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphoglycerate mutase protein
SCN18_14_9_16_R1_B_scaffold_5263_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2272..3189)
DNA (918bp) protein (306aa)
Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific {ECO:0000313|EMBL:EUB96976.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EUB96976.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
50S ribosomal protein L3 glutamine methyltransferase PrmB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C0S9_9RHIZ
SAM-dependent methyltransferase
SCN18_14_9_16_R1_B_scaffold_5263_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3278..4087
DNA (810bp) protein (270aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
rluB; ribosomal large subunit pseudouridine synthase B (EC:4.2.1.70)
pseudouridylate synthase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037FE727
SCN18_14_9_16_R1_B_scaffold_5263_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4211..5080
DNA (870bp) protein (290aa)
RND family efflux transporter, MFP subunit n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VHS5_9RHIZ
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJN05542.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
macA; macrolide-specific efflux protein MacA precursor
SCN18_14_9_16_R1_B_scaffold_5263_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5145..5333
DNA (189bp) protein (63aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JW36_DESFR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFL51396.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
pyridine nucleotide-disulfide oxidoreductase family protein
Displaying 7 items

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