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SCN18_14_9_16_R1_B_scaffold_5505

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_5505_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(176..769)
DNA (594bp) protein (198aa)
DnaJ family molecular chaperone n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYT4_9RHIZ
DnaJ family molecular chaperone {ECO:0000313|EMBL:EYR82282.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
dnaJ; molecular chaperone DnaJ
SCN18_14_9_16_R1_B_scaffold_5505_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(933..2018)
DNA (1086bp) protein (362aa)
tRNA-dihydrouridine synthase A {ECO:0000313|EMBL:EYR82283.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR82283.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
tRNA-dihydrouridine synthase A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU78_9RHIZ
putative tRNA-dihydrouridine synthase A
SCN18_14_9_16_R1_B_scaffold_5505_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2123..2653
DNA (531bp) protein (177aa)
Ferripyochelin binding protein {ECO:0000313|EMBL:EYR82284.1}; EC=2.3.1.- {ECO:0000313|EMBL:EYR82284.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ferripyochelin binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERP8_9RHIZ
acetyltransferase
SCN18_14_9_16_R1_B_scaffold_5505_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2714..3121)
DNA (408bp) protein (136aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPQ1_9RHIZ
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EYR82286.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
zur; zinc uptake transcriptional regulator protein
SCN18_14_9_16_R1_B_scaffold_5505_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3118..3939)
DNA (822bp) protein (274aa)
High-affinity zinc uptake system membrane protein ZnuB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYS9_9RHIZ
High-affinity zinc uptake system membrane protein ZnuB {ECO:0000313|EMBL:EYR82287.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC-3 protein
SCN18_14_9_16_R1_B_scaffold_5505_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3932..4864)
DNA (933bp) protein (311aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Zinc import ATP-binding protein ZnuC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU73_9RHIZ
ABC transporter, zinc containing nucleotide binding/ATPase protein
SCN18_14_9_16_R1_B_scaffold_5505_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5120..5938
DNA (819bp) protein (273aa)
High-affinity zinc uptake system protein ZnuA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERP3_9RHIZ
High-affinity zinc uptake system protein ZnuA {ECO:0000313|EMBL:EYR82289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
znuA; high-affinity zinc uptake system protein ZnuA precursor
SCN18_14_9_16_R1_B_scaffold_5505_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5945..6976)
DNA (1032bp) protein (344aa)
L-glyceraldehyde 3-phosphate reductase Gpr {ECO:0000313|EMBL:EYR82291.1}; EC=1.1.1.- {ECO:0000313|EMBL:EYR82291.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
L-glyceraldehyde 3-phosphate reductase Gpr n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPP7_9RHIZ
putative oxidoreductase protein
SCN18_14_9_16_R1_B_scaffold_5505_9
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7169..7915)
DNA (747bp) protein (249aa)
Putative dehydrogenase {ECO:0000313|EMBL:EYR80673.1}; EC=1.1.99.28 {ECO:0000313|EMBL:EYR80673.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7M6_9RHIZ
putative oxidoreductase protein
Displaying 9 items

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