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SCN18_14_9_16_R1_B_scaffold_5740

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_5740_1
unknown

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comp(3..176)
DNA (174bp) protein (58aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_5740_2
SCNPILOT_SOLID_1_TRIM150_Plasmid_7, SCNPILOT_SOLID_1_TRIM150_Plasmid_7, SCNPILOT_SOLID_1_TRIM150_Plasmid_7, SCNPILOT_SOLID_1_TRIM150_Plasmid_7, SCNPILOT_SOLID_1_TRIM150_Plasmid_7, Plasmid-like

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comp(170..979)
DNA (810bp) protein (270aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CIV2_9RHIZ
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EJN06764.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
trbJ; conjugal transfer protein TrbJ
SCN18_14_9_16_R1_B_scaffold_5740_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(951..3419)
DNA (2469bp) protein (823aa)
Conjugal transfer protein n=2 Tax=Agrobacterium tumefaciens complex RepID=Q7D2P4_AGRT5
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KJF70690.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
trbE; conjugal transfer protein TrbE
SCN18_14_9_16_R1_B_scaffold_5740_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3429..3728)
DNA (300bp) protein (100aa)
Type IV secretory pathway, TrbD component n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HV32_9RHIZ
Type IV secretory pathway, TrbD component {ECO:0000313|EMBL:EJN06766.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
trbD; conjugal transfer protein TrbD
SCN18_14_9_16_R1_B_scaffold_5740_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3721..4104)
DNA (384bp) protein (128aa)
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VL12_9RHIZ
Type IV secretory pathway, VirB2 component (Pilin) {ECO:0000313|EMBL:EJN06767.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
trbC; conjugal transfer protein TrbC
SCN18_14_9_16_R1_B_scaffold_5740_6
SCNPILOT_SOLID_1_TRIM150_Plasmid_7, SCNPILOT_SOLID_1_TRIM150_Plasmid_7, SCNPILOT_SOLID_1_TRIM150_Plasmid_7, SCNPILOT_SOLID_1_TRIM150_Plasmid_7, SCNPILOT_SOLID_1_TRIM150_Plasmid_7, Plasmid-like

Not on your lists

comp(4094..4906)
DNA (813bp) protein (271aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HVE5_9RHIZ
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EJN06768.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
trbB; conjugal transfer protein TrbB
Displaying 6 items

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