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SCN18_14_9_16_R1_B_scaffold_5860

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_5860_1
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(147..1472)
DNA (1326bp) protein (442aa)
GTPase HflX n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ET79_9RHIZ
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hflX; GTPase HflX
SCN18_14_9_16_R1_B_scaffold_5860_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1550..1792)
DNA (243bp) protein (81aa)
RNA-binding protein Hfq n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVU0_9RHIZ
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
RNA-binding protein Hfq
SCN18_14_9_16_R1_B_scaffold_5860_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1890..2753)
DNA (864bp) protein (288aa)
D-alanine aminotransferase Dat {ECO:0000313|EMBL:EYR80027.1}; EC=2.6.1.21 {ECO:0000313|EMBL:EYR80027.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase n=1 Tax=Rhizobium sp. CF122 RepID=J2RPD7_9RHIZ
D-amino acid aminotransferase
SCN18_14_9_16_R1_B_scaffold_5860_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2763..4139)
DNA (1377bp) protein (459aa)
Trk system potassium uptake protein TrkA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCS0_9RHIZ
K+ transport systemNAD-binding component {ECO:0000313|EMBL:EYR80028.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
trkA; Trk system potassium uptake protein trkA
SCN18_14_9_16_R1_B_scaffold_5860_5
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4170..4820)
DNA (651bp) protein (217aa)
Nitrogen assimilation regulatory protein NtrX n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0F4_9RHIZ
Nitrogen assimilation regulatory protein NtrX {ECO:0000313|EMBL:EYR80029.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Displaying 5 items

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