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SCN18_14_9_16_R1_B_scaffold_11547

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_11547_1
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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comp(2..934)
DNA (933bp) protein (311aa)
Arabinose efflux permease n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IJC1_RHIML
Arabinose efflux permease
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEG06433.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
SCN18_14_9_16_R1_B_scaffold_11547_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(924..1319)
DNA (396bp) protein (132aa)
Alcohol dehydrogenase, zinc-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20Z18_RHOPB
zinc-binding alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding {ECO:0000313|EMBL:ABD89618.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_14_9_16_R1_B_scaffold_11547_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1421..1888)
DNA (468bp) protein (156aa)
Quinone oxidoreductase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJ27_AGRRK
quinone oxidoreductase
Quinone oxidoreductase protein {ECO:0000313|EMBL:ACM29919.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCN18_14_9_16_R1_B_scaffold_11547_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1885..3405)
DNA (1521bp) protein (507aa)
pentachlorophenol monooxygenase (EC:1.14.13.50)
UPI0003CF5EE3 related cluster n=1 Tax=unknown RepID=UPI0003CF5EE3
Uncharacterized protein {ECO:0000313|EMBL:ESW82485.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCN18_14_9_16_R1_B_scaffold_11547_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3450..3620
DNA (171bp) protein (57aa)
UPI0003CEE4BA related cluster n=1 Tax=unknown RepID=UPI0003CEE4BA
MarR family transcriptional regulator {ECO:0000313|EMBL:ESW82486.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
MarR family transcriptional regulator protein
SCN18_14_9_16_R1_B_scaffold_11547_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3595..3807
DNA (213bp) protein (71aa)
MarR family transcriptional regulator n=1 Tax=Methyloferula stellata RepID=UPI00036F9366
hypothetical protein
MarR family transcriptional regulator {ECO:0000313|EMBL:ESW82486.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCN18_14_9_16_R1_B_scaffold_11547_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3836..3958
DNA (123bp) protein (41aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI0003826786
putative IS66 family transposase, OrfA
Putative IS66 family transposase, OrfA {ECO:0000313|EMBL:AGB73651.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 7 items

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