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SCN18_14_9_16_R1_B_scaffold_2192

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2192_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..934
DNA (933bp) protein (311aa)
ribose transport ATP-binding protein rbsA (EC:3.6.3.17)
Ribose ABC transport system, ATP-binding protein RbsA n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3ACE6_9RHOB
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:GAD55319.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;"
SCN18_14_9_16_R1_B_scaffold_2192_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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882..1427
DNA (546bp) protein (182aa)
D-aminopeptidase (EC:3.4.11.19)
D-aminopeptidase {ECO:0000313|EMBL:AAK64706.1}; EC=3.4.11.19 {ECO:0000313|EMBL:AAK64706.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
D-aminopeptidase n=2 Tax=Rhizobium meliloti RepID=M4MI15_RHIML
SCN18_14_9_16_R1_B_scaffold_2192_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1424..2224
DNA (801bp) protein (267aa)
D-aminopeptidase DppA {ECO:0000313|EMBL:EYR79240.1}; EC=3.4.11.- {ECO:0000313|EMBL:EYR79240.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
D-aminopeptidase (EC:3.4.11.-)
D-aminopeptidase DppA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ELM8_9RHIZ
SCN18_14_9_16_R1_B_scaffold_2192_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2225..3160)
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UJW6_SINMW
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABR63946.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCN18_14_9_16_R1_B_scaffold_2192_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3403..5028
DNA (1626bp) protein (542aa)
Amidohydrolase 3 n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FSH7_RHIML
amidohydrolase
Amidohydrolase 3 {ECO:0000313|EMBL:EHK79927.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCN18_14_9_16_R1_B_scaffold_2192_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5085..6677
DNA (1593bp) protein (531aa)
Heme-binding protein A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVQ8_9RHIZ
Heme-binding protein A {ECO:0000313|EMBL:EYR83103.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter substrate-binding protein
SCN18_14_9_16_R1_B_scaffold_2192_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6764..7699
DNA (936bp) protein (312aa)
Glutathione transport system permease protein GsiC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFP8_9RHIZ
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:EYR83102.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter permease
SCN18_14_9_16_R1_B_scaffold_2192_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7705..8526
DNA (822bp) protein (274aa)
ABC-type transporter, integral membrane subunit n=5 Tax=Rhizobium meliloti RepID=F6BX61_SINMB
dppC; Dipeptide transport system permease protein dppC
ABC transporter,permease,likely involved in transport of lysine,ectoine,and asparagine {ECO:0000313|EMBL:AGG69735.1}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
SCN18_14_9_16_R1_B_scaffold_2192_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8523..9434
DNA (912bp) protein (304aa)
ABC transporter,ATP-binding protein,likely involved in transport of lysine,ectoine,and asparagine n=2 Tax=Rhizobium meliloti RepID=M4MEL4_RHIML
putative peptide ABC transporter ATP-binding protein y4tR
Putative peptide ABC transporter ATP-binding protein y4tR {ECO:0000313|EMBL:AHK46622.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCN18_14_9_16_R1_B_scaffold_2192_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9431..10396
DNA (966bp) protein (322aa)
Glutathione import ATP-binding protein GsiA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4N8_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDP74625.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
putative oligopeptide ABC transporter, ATP-binding protein
SCN18_14_9_16_R1_B_scaffold_2192_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10374..10820)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1K8_9RHIZ
Phosphopantetheinyl transferase
Phosphopantetheinyl transferase {ECO:0000313|EMBL:CDN55229.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Displaying 11 items

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