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SCN18_14_9_16_R1_B_scaffold_2639

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2639_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..734)
DNA (732bp) protein (244aa)
Aerobic cobaltochelatase subunit CobN {ECO:0000313|EMBL:EYR80633.1}; EC=6.6.1.2 {ECO:0000313|EMBL:EYR80633.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cobaltochelatase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000364F649
cobN; cobalamin biosynthetic protein CobN
SCN18_14_9_16_R1_B_scaffold_2639_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(984..2033)
DNA (1050bp) protein (350aa)
Protein CobW n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CP29_9RHIZ
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:EYR80632.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cobW; Protein cobW
SCN18_14_9_16_R1_B_scaffold_2639_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2037..2561)
DNA (525bp) protein (175aa)
Adenosylcobinamide kinase {ECO:0000313|EMBL:EYR80631.1}; EC=2.7.1.156 {ECO:0000313|EMBL:EYR80631.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Bifunctional adenosylcobalamin biosynthesis protein CobP n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJU3_RHITR
cobP; bifunctional adenosylcobalamin biosynthesis protein CobP
SCN18_14_9_16_R1_B_scaffold_2639_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2563..3348)
DNA (786bp) protein (262aa)
cobalt transporter n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036C535B
Putative cobalt transporter subunit CbtA {ECO:0000313|EMBL:EYR80630.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cbtA; cobalt transporter, subunit CbtA
SCN18_14_9_16_R1_B_scaffold_2639_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3361..3537)
DNA (177bp) protein (59aa)
Cobalt transporter subunit CbtB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBX7_9RHIZ
Cobalt transporter subunit CbtB {ECO:0000313|EMBL:EYR80629.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cbtB; cobalt transporter, subunit CbtB
SCN18_14_9_16_R1_B_scaffold_2639_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4031..5464)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000367389B
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:EYR80628.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2639_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5558..5686)
DNA (129bp) protein (43aa)
SCN18_14_9_16_R1_B_scaffold_2639_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5834..7297)
DNA (1464bp) protein (488aa)
Cobyric acid synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCE9_9RHIZ
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cobQ; protein CobQ
SCN18_14_9_16_R1_B_scaffold_2639_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7543..7686
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWZ4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80626.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2639_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8438..9415
DNA (978bp) protein (326aa)
Glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEU2_9RHIZ
ABC-type glycine betaine transport, periplasmic subunit {ECO:0000313|EMBL:EHS49780.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
putative substrate-binding component of ABC transporter
Displaying 10 items

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