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SCN18_14_9_16_R1_B_scaffold_2788

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2788_1
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..707)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036297D2
Polyamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIF83908.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
polyamine ABC transporter substrate-binding protein
SCN18_14_9_16_R1_B_scaffold_2788_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(723..1754)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037C6FB4
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYR83026.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter, substrate-binding protein
SCN18_14_9_16_R1_B_scaffold_2788_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1902..2885)
DNA (984bp) protein (328aa)
Putative transcriptional regulator protein, AraC family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U504_9RHIZ
Putative transcriptional regulator protein, AraC family {ECO:0000313|EMBL:ENN85388.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
AraC family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_2788_4
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3102..3869
DNA (768bp) protein (256aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase type-2 n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNS0_RHISN
Dehydrogenase {ECO:0000313|EMBL:EYR81484.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_2788_5
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3885..5066
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase protein (EC:2.3.1.9)
Acetyl-CoA acetyltransferase ThlA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC34_9RHIZ
Acety-CoA acetytransferase {ECO:0000313|EMBL:EYR81485.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_2788_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5091..6218
DNA (1128bp) protein (376aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUM3_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENN85390.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
acyl-CoA dehydrogenase domain-containing protein
SCN18_14_9_16_R1_B_scaffold_2788_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6282..7514
DNA (1233bp) protein (411aa)
3-methyl-2-oxobutanoate dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXA9_9RHIZ
3-methyl-2-oxobutanoate dehydrogenase {ECO:0000313|EMBL:ENN85391.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
bkDa1; 2-oxoisovalerate dehydrogenase subunit alpha
SCN18_14_9_16_R1_B_scaffold_2788_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7516..8529
DNA (1014bp) protein (338aa)
bkdA2; 2-oxoisovalerate dehydrogenase, E1 component, subunit beta (EC:1.2.4.4)
2-oxoisovalerate dehydrogenase subunit beta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BX26_9RHIZ
Pyruvate/2-oxoglutarate dehydrogenase complex E1 component {ECO:0000313|EMBL:EYR81488.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_2788_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8532..9008
DNA (477bp) protein (159aa)
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Rhizobium giardinii RepID=UPI000371F66E
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase E2 component {ECO:0000313|EMBL:EYR81489.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
bkdB; dihydrolipoamide acyltransferase component of branched-chain alpha-keto aciddehydrogenase complex
Displaying 9 items

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