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SCN18_14_9_16_R1_B_scaffold_2852

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2852_1
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..799)
DNA (798bp) protein (266aa)
glcE2; glycolate oxidase, subunit GlcE (EC:1.1.3.15)
Glycolate oxidase subunit GlcE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXY9_9RHIZ
Glycolate oxidase subunit GlcE {ECO:0000313|EMBL:EYR80114.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_2852_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(796..2232)
DNA (1437bp) protein (479aa)
Glycolate oxidase subunit GlcD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTC3_9RHIZ
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:EYR80113.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glcD; Glycolate oxidase, subunit GlcD
SCN18_14_9_16_R1_B_scaffold_2852_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2391..3287
DNA (897bp) protein (299aa)
HTH-type transcriptional activator TtdR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQV8_9RHIZ
HTH-type transcriptional activator TtdR {ECO:0000313|EMBL:EYR80112.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
LysR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_2852_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3297..4574)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXU5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80108.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2852_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4721..5515
DNA (795bp) protein (265aa)
Pyruvate dehydrogenase complex repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6X8_9RHIZ
Pyruvate dehydrogenase complex repressor {ECO:0000313|EMBL:EYR80107.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
regulator of the GntR family
SCN18_14_9_16_R1_B_scaffold_2852_6
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5585..6109
DNA (525bp) protein (175aa)
NTP pyrophosphohydrolase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2F7_9RHIZ
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EYR80106.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
NTP pyrophosphohydrolase protein, MuT/nudix family
SCN18_14_9_16_R1_B_scaffold_2852_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6283..7785
DNA (1503bp) protein (501aa)
Phosphate transport permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYL2_9RHIZ
Phosphate transport permease {ECO:0000313|EMBL:EYR80105.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phosphate permease
SCN18_14_9_16_R1_B_scaffold_2852_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7799..8533
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHZ3_9RHIZ
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2852_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8676..8840
DNA (165bp) protein (55aa)
glutamate--cysteine ligase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FD0169
glutamate--cysteine ligase, plant type
Glutamate--cysteine ligase {ECO:0000313|EMBL:ESX82771.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Displaying 9 items

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