ggKbase home page

SCN18_14_9_16_R1_B_scaffold_2925

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2925_1
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322..1269
DNA (948bp) protein (316aa)
Putative secreted protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PHA4_RHIML
hypothetical protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF70844.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
SCN18_14_9_16_R1_B_scaffold_2925_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1339..2823
DNA (1485bp) protein (495aa)
rbsA; ribose import ATP-binding protein RbsA (EC:3.6.3.17)
Ribose import ATP-binding protein RbsA n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P896_RHIML
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:KJF70843.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
SCN18_14_9_16_R1_B_scaffold_2925_3
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2859..3851
DNA (993bp) protein (331aa)
Putative membrane protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PLS1_RHIML
Ribose ABC transporter permease {ECO:0000313|EMBL:KJF70842.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2925_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3944..4879
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PGX3_RHIML
hypothetical protein
Transcriptional regulator LsrR {ECO:0000313|EMBL:AFL50493.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCN18_14_9_16_R1_B_scaffold_2925_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4866..5552)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003788479
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:CDX31556.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
HAD family hydrolase
SCN18_14_9_16_R1_B_scaffold_2925_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5853..6767
DNA (915bp) protein (305aa)
Haloacetate dehalogenase DehH n=1 Tax=Octadecabacter arcticus 238 RepID=M9RPT0_9RHOB
Alpha/beta hydrolase family
Alpha/beta hydrolase family {ECO:0000313|EMBL:AHY47753.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
SCN18_14_9_16_R1_B_scaffold_2925_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6854..8023
DNA (1170bp) protein (390aa)
Sugar binding protein of sugar ABC transporter n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3AKQ7_9RHOB
Sugar binding protein of sugar ABC transporter {ECO:0000313|EMBL:GAD55318.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;"
sugar ABC transporter periplasmatic substrate-binding protein
SCN18_14_9_16_R1_B_scaffold_2925_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8098..8691
DNA (594bp) protein (198aa)
Ribose ABC transport system, ATP-binding protein RbsA n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3ACE6_9RHOB
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:GAD55319.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;"
sugar ABC transporter ATP-binding protein
Displaying 8 items

View Taxonomy