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SCN18_26_2_15_R2_B_scaffold_2375

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_2375_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..357
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGQ0_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65547.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2375_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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512..1480
DNA (969bp) protein (323aa)
dusA; tRNA-dihydrouridine synthase (EC:1.-.-.-)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:CCB65545.1}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:CCB65545.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
tRNA-dihydrouridine synthase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGP8_HYPSM
SCN18_26_2_15_R2_B_scaffold_2375_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1483..2310
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGP7_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65544.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2375_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2353..3858)
DNA (1506bp) protein (502aa)
phosphomannomutase (EC:5.4.2.2 5.4.2.8)
Putative Phosphomannomutase/phosphoglucomutase (AlgC) {ECO:0000313|EMBL:CCB65543.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CCB65543.1};; EC=5.4.2.8 {ECO:0000313|EMBL:CCB65543.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative Phosphomannomutase/phosphoglucomutase (AlgC) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGP6_HYPSM
SCN18_26_2_15_R2_B_scaffold_2375_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3988..4563)
DNA (576bp) protein (192aa)
Aspartyl protease-like protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4H3_9RHIZ
aspartyl protease-like protein
Aspartyl protease-like protein {ECO:0000313|EMBL:AGK57908.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_2375_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4610..5302)
DNA (693bp) protein (231aa)
Aspartyl protease-like protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGP4_HYPSM
aspartyl protease
Aspartyl protease-like protein {ECO:0000313|EMBL:CCB65541.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2375_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5324..6958)
DNA (1635bp) protein (545aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative integral membrane sensor signal transduction histidine kinase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGP3_HYPSM
integral membrane sensor signal transduction histidine kinase
SCN18_26_2_15_R2_B_scaffold_2375_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7081..7662
DNA (582bp) protein (194aa)
Nuclease n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BCQ7_9RHIZ
nuclease
Nuclease {ECO:0000313|EMBL:AGK57905.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_2375_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7674..8285
DNA (612bp) protein (204aa)
Glutathione S-transferase domain protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGP1_HYPSM
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain protein {ECO:0000313|EMBL:CCB65538.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2375_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8321..8767)
DNA (447bp) protein (149aa)
TIGR01244 family protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZR06_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CPR21896.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_2375_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8958..9458
DNA (501bp) protein (167aa)
Putative transcriptional regulator, AsnC/Lrp family n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JG19_HYPSM
AsnC/Lrp family transcriptional regulator
Putative transcriptional regulator, AsnC/Lrp family {ECO:0000313|EMBL:CCB65537.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2375_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9462..10421)
DNA (960bp) protein (320aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Putative 2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:CCB65536.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CCB65536.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative 2-hydroxy-3-oxopropionate reductase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JG18_HYPSM
SCN18_26_2_15_R2_B_scaffold_2375_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10483..11178)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BBK1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57901.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_2375_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11361..11861
DNA (501bp) protein (167aa)
Threonine dehydratase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JG16_HYPSM
threonine dehydratase
Threonine dehydratase {ECO:0000313|EMBL:CCB65534.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Displaying 14 items

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