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SCN18_26_2_15_R2_B_scaffold_2858

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_2858_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..956
DNA (954bp) protein (318aa)
von Willebrand factor A n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3N8_9RHIZ
von Willebrand factor A
von Willebrand factor A {ECO:0000313|EMBL:AGK58124.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_2858_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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980..1864
DNA (885bp) protein (295aa)
von Willebrand factor type A n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHJ0_HYPSM
von Willebrand factor A
von Willebrand factor type A {ECO:0000313|EMBL:CCB65640.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2858_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1861..2901
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHJ1_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65641.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2858_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2911..3498)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHJ2_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65642.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2858_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3552..4589)
DNA (1038bp) protein (346aa)
General L-amino acid-binding periplasmic protein AapJ n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHJ3_HYPSM
aapJ; general L-amino acid-binding periplasmic protein AapJ
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:CCB65643.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2858_6
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4778..5965
DNA (1188bp) protein (396aa)
metC; cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase, PLP-dependent (Beta-cystathionase) {ECO:0000313|EMBL:CCB65645.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CCB65645.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Cystathionine beta-lyase, PLP-dependent (Beta-cystathionase) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHJ5_HYPSM
SCN18_26_2_15_R2_B_scaffold_2858_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5983..7971)
DNA (1989bp) protein (663aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3P3_9RHIZ
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AGK58129.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_2858_trna_1
unknown

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comp(8149..8221)
DNA (73bp)
transferRNA Arg
SCN18_26_2_15_R2_B_scaffold_2858_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8554..8808
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHJ7_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65647.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2858_9
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8941..9270
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHJ8_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65648.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2858_10
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9340..9876)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDC2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK58135.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_2858_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10308..10535
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JV69_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22885.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R2_B_scaffold_2858_12
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10724..10972
DNA (249bp) protein (83aa)
DNA ligase D n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TFS2_MESCW
DNA ligase D
DNA ligase D {ECO:0000313|EMBL:ADV09952.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying 13 items

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