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SCN18_26_2_15_R2_B_scaffold_3240

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_3240_1
unknown

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comp(1..81)
DNA (81bp) protein (27aa)

This feature has no annotations

SCN18_26_2_15_R2_B_scaffold_3240_2
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(119..589)
DNA (471bp) protein (157aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B2S0_9RHIZ
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AGK57288.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_3240_3
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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993..1199
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4Y2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57287.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_3240_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1201..2454
DNA (1254bp) protein (418aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9R3_9RHIZ
ECF subfamily RNA polymerase sigma-24 subunit
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AGK57286.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_3240_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2528..2941
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAY6_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57285.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_3240_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3011..3361
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1C0_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57284.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_3240_7
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3633..4292)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036F9E3A
TetR-family transcriptional regulator, putative {ECO:0000313|EMBL:EBA11961.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CCS2.;"
transcriptional regulator
SCN18_26_2_15_R2_B_scaffold_3240_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4445..5557
DNA (1113bp) protein (371aa)
RND family efflux transporter MFP subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MCF5_9RHIZ
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EKF18465.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
putative RND efflux transporter
SCN18_26_2_15_R2_B_scaffold_3240_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5594..8764
DNA (3171bp) protein (1057aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000360B15E
Acr/RND family transmembrane transporter {ECO:0000313|EMBL:ESW61990.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
acriflavin resistance protein
SCN18_26_2_15_R2_B_scaffold_3240_10
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9057..10190)
DNA (1134bp) protein (378aa)
Major facilitator superfamily MFS_1 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHR8_GLUDA
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACI52546.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
Displaying 10 items

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