ggKbase home page

SCN18_26_2_15_R2_B_scaffold_3269

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_3269_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2739)
DNA (2739bp) protein (913aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
glycine dehydrogenase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037D81AB
glycine dehydrogenase
SCN18_26_2_15_R2_B_scaffold_3269_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2762..3121)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035FF016
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
gcvH; glycine cleavage system H protein
SCN18_26_2_15_R2_B_scaffold_3269_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3132..4307)
DNA (1176bp) protein (392aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981, ECO:0000313|EMBL:CPR17800.1}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981, ECO:0000313|EMBL:CPR17800.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003773C3E
glycine cleavage system aminomethyltransferase T
SCN18_26_2_15_R2_B_scaffold_3269_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4665..4850)
DNA (186bp) protein (62aa)
SCN18_26_2_15_R2_B_scaffold_3269_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5164..5880)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SH66_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB50231.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_26_2_15_R2_B_scaffold_3269_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5883..6602)
DNA (720bp) protein (240aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
ribulose-phosphate 3-epimerase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037B482C
ribulose-phosphate 3-epimerase
SCN18_26_2_15_R2_B_scaffold_3269_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6605..7597)
DNA (993bp) protein (331aa)
CbbX n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D436F1
CbbX protein
CbbX protein {ECO:0000313|EMBL:AID34953.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCN18_26_2_15_R2_B_scaffold_3269_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7702..8106)
DNA (405bp) protein (135aa)
cbbS; ribulose bisphosphate carboxylase small chain CbbS (EC:4.1.1.39)
Ribulose bisphosphate carboxylase small chain CbbS {ECO:0000313|EMBL:AEI08122.1}; EC=4.1.1.39 {ECO:0000313|EMBL:AEI08122.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Ribulose bisphosphate carboxylase small chain CbbS n=2 Tax=Oligotropha carboxidovorans RepID=F8BQM9_OLICM
SCN18_26_2_15_R2_B_scaffold_3269_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8138..9196)
DNA (1059bp) protein (353aa)
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain 3 {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit 3 {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Ribulose bisphosphate carboxylase large chain 3 n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=RBL1C_BRASB
Displaying 9 items

View Taxonomy