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SCN18_26_2_15_R2_B_scaffold_3439

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_3439_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(173..733)
DNA (561bp) protein (187aa)
GcrA cell cycle regulator n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4U3_HYPSM
GcrA cell cycle regulator
GcrA cell cycle regulator {ECO:0000313|EMBL:CCB63264.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_3439_2
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1398..2573
DNA (1176bp) protein (392aa)
argD; succinylornithine transaminase, also has acetylornitine transaminase activity, PLP-dependent (EC:2.6.1.11 2.6.1.-)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107, ECO:0000313|EMBL:CCB63266.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Acetylornithine aminotransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4U5_HYPSM
SCN18_26_2_15_R2_B_scaffold_3439_3
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2570..3553
DNA (984bp) protein (328aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000313|EMBL:CCB63267.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Ornithine carbamoyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4U6_HYPSM
SCN18_26_2_15_R2_B_scaffold_3439_4
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3569..4531
DNA (963bp) protein (321aa)
33 kDa chaperonin n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4U7_HYPSM
hslO; heat shock protein 33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673, ECO:0000313|EMBL:CCB63268.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_3439_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4568..5134)
DNA (567bp) protein (189aa)
Signal transduction protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4U8_HYPSM
signal transduction protein
Signal transduction protein {ECO:0000313|EMBL:CCB63269.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_3439_6
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5355..6500)
DNA (1146bp) protein (382aa)
argE; acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950, ECO:0000313|EMBL:CCB63270.1}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953, ECO:0000313|EMBL:CCB63270.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Acetylornithine deacetylase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4U9_HYPSM
SCN18_26_2_15_R2_B_scaffold_3439_7
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6540..6995)
DNA (456bp) protein (152aa)
Protein ApaG n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4V0_HYPSM
apaG; ApaG domain-containing protein
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_3439_8
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7006..8217)
DNA (1212bp) protein (404aa)
metZ; O-succinylhomoserine sulfhydrylase (EC:2.5.1.-)
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:CCB63272.1}; EC=2.5.1.- {ECO:0000313|EMBL:CCB63272.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
O-succinylhomoserine sulfhydrylase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4V1_HYPSM
SCN18_26_2_15_R2_B_scaffold_3439_9
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

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8504..8800
DNA (297bp) protein (99aa)
dcd; 2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13)
2'-deoxycytidine 5'-triphosphate deaminase {ECO:0000313|EMBL:CCB63273.1}; EC=3.5.4.13 {ECO:0000313|EMBL:CCB63273.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
2'-deoxycytidine 5'-triphosphate deaminase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4V2_HYPSM
Displaying 9 items

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