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SCN18_30_10_14_R2_B_scaffold_4607

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4607_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..532
DNA (531bp) protein (177aa)
SCN18_30_10_14_R2_B_scaffold_4607_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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832..2235
DNA (1404bp) protein (468aa)
Ppx/GppA phosphatase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSK6_9RHIZ
Ppx/GppA phosphatase {ECO:0000313|EMBL:EHK56292.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Ppx/GppA phosphatase
SCN18_30_10_14_R2_B_scaffold_4607_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2229..2951
DNA (723bp) protein (241aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M8U2_9RHIZ
23S rRNA methylase
SCN18_30_10_14_R2_B_scaffold_4607_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2988..4664)
DNA (1677bp) protein (559aa)
major facilitator transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031E6732
Major facilitator superfamily transporter {ECO:0000313|EMBL:EKF18549.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
major facilitator superfamily transporter
SCN18_30_10_14_R2_B_scaffold_4607_trna_1
unknown

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4857..4927
DNA (71bp)
transferRNA Gln
SCN18_30_10_14_R2_B_scaffold_4607_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5298..5513
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003744746
Uncharacterized protein {ECO:0000313|EMBL:KGE80210.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4607_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5510..6040
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWG5_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18720.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_30_10_14_R2_B_scaffold_4607_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6004..6807)
DNA (804bp) protein (268aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WTU0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAJ95223.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4607_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6817..7623)
DNA (807bp) protein (269aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Amorphus coralli RepID=UPI0003693158
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:KEZ79277.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
TRAP dicarboxylate transporter, DctM subunit
Displaying 9 items

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