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SCN18_30_10_14_R2_B_scaffold_2828

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2828_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..359
DNA (357bp) protein (119aa)
LuxR family transcriptional regulator n=1 Tax=Martelella mediterranea RepID=UPI0003766A04
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AJY46821.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_30_10_14_R2_B_scaffold_2828_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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359..970
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DAT3_MYXXD
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
SCN18_30_10_14_R2_B_scaffold_2828_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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967..2211
DNA (1245bp) protein (415aa)
Mur ligase middle domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3B6_SPHTD
Mur ligase middle domain-containing protein
Mur ligase middle domain protein {ECO:0000313|EMBL:ACZ38733.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCN18_30_10_14_R2_B_scaffold_2828_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2201..4456
DNA (2256bp) protein (752aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein n=1 Tax=Citreicella sp. 357 RepID=I1AXP4_9RHOB
Dehydrogenase {ECO:0000313|EMBL:KEQ10634.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
SCN18_30_10_14_R2_B_scaffold_2828_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4484..5065)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI000374804B
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCN18_30_10_14_R2_B_scaffold_2828_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5281..6576
DNA (1296bp) protein (432aa)
Branched-chain amino acid ABC transporter, substrate-binding protein n=2 Tax=uncultured bacterium RepID=C6KVE9_9BACT
Branched-chain amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:BAH89761.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative ABC transporter substrate-binding protein
SCN18_30_10_14_R2_B_scaffold_2828_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6653..7369
DNA (717bp) protein (239aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMW0_VARPD
putative branched-chain amino acid ABC transporter, ATP-binding protein
Putative ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDX32979.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCN18_30_10_14_R2_B_scaffold_2828_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7366..8073
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000375B13A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ10617.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
SCN18_30_10_14_R2_B_scaffold_2828_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8078..8944
DNA (867bp) protein (289aa)
Putative permease component of ABC transporter n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M507_RHIL3
ABC transporter permease {ECO:0000313|EMBL:KGT75335.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
ABC transporter permease
SCN18_30_10_14_R2_B_scaffold_2828_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8956..9987
DNA (1032bp) protein (344aa)
ABC transporter permease protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P134_9RHOB
ABC transporter permease protein {ECO:0000313|EMBL:EAV41219.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2828_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10006..10539
DNA (534bp) protein (178aa)
Cupin domain-containing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6V3_9RHIZ
Cupin domain-containing protein {ECO:0000313|EMBL:EYR83624.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
2,4'-dihydroxyacetophenone dioxygenase
SCN18_30_10_14_R2_B_scaffold_2828_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10541..11296)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE8_MESSB
Short-chain dehydrogenase {ECO:0000313|EMBL:KIF66113.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
short-chain dehydrogenase/reductase SDR
Displaying 12 items

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