ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2862

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2862_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..413)
DNA (411bp) protein (137aa)
Nifu protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM0_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05006.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R2_B_scaffold_2862_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(416..952)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKX5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30977.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2862_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(979..1917)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPB5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30976.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2862_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2034..2321)
DNA (288bp) protein (96aa)
Putative membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM2_OLICO
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AEI05004.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R2_B_scaffold_2862_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2390..2650)
DNA (261bp) protein (87aa)
Hemerythrin HHE cation binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05003.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R2_B_scaffold_2862_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3302..3877
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AKH98806.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
SCN18_30_10_14_R2_B_scaffold_2862_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3877..4143
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M05_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07029.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_30_10_14_R2_B_scaffold_2862_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4391..4666
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000369BE8E
Uncharacterized protein {ECO:0000313|EMBL:KJS10184.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2862_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4698..5879)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003677056
NnrS protein
NnrS protein {ECO:0000313|EMBL:BAQ16583.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCN18_30_10_14_R2_B_scaffold_2862_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5876..6568)
DNA (693bp) protein (231aa)
NnrUfamily protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M115_METRJ
NnrU family protein
NnrUfamily protein {ECO:0000313|EMBL:AIQ90743.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
SCN18_30_10_14_R2_B_scaffold_2862_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6720..7211
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000365E074
Nitrite-sensitive transcriptional repressor NsrR {ECO:0000313|EMBL:ESR23426.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
BadM/Rrf2 family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_2862_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7295..7690
DNA (396bp) protein (132aa)
ferredoxin n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B2C42
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AHB47817.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_30_10_14_R2_B_scaffold_2862_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7683..9056
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035CBC2F
Cgl2538; hypothetical protein
2-methylcitrate dehydratase {ECO:0000313|EMBL:KEI24108.1}; TaxID=1079988 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum ATCC 14067.;"
SCN18_30_10_14_R2_B_scaffold_2862_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9084..9899
DNA (816bp) protein (272aa)
phosphosulfolactate synthase ComA (EC:4.4.1.19)
Phosphosulfolactate synthase ComA {ECO:0000313|EMBL:AGG89629.1}; EC=4.4.1.19 {ECO:0000313|EMBL:AGG89629.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000364E346
SCN18_30_10_14_R2_B_scaffold_2862_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10022..11188)
DNA (1167bp) protein (389aa)
Putative arylsulfatase regulatory protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KGI6_9RHOB
Sulfatase maturase {ECO:0000313|EMBL:KGE02182.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
Displaying 15 items

View Taxonomy