ggKbase home page

SCN18_30_10_14_R2_B_scaffold_15943

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_15943_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..182)
DNA (180bp) protein (60aa)
C4-dicarboxylate ABC transporter n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D44441
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:EHK55790.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TRAP-type C4-dicarboxylate transport system, periplasmic component
SCN18_30_10_14_R2_B_scaffold_15943_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222..1205)
DNA (984bp) protein (328aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9Y733_KETVW
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:AEM42223.1}; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
SCN18_30_10_14_R2_B_scaffold_15943_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1218..2111)
DNA (894bp) protein (298aa)
Transcriptional regulator, IclR family/regucalcin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Z7_PELHB
IclR family transcriptional regulator
Transcriptional regulator, IclR family/regucalcin {ECO:0000313|EMBL:AEQ50292.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_30_10_14_R2_B_scaffold_15943_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2108..2986)
DNA (879bp) protein (293aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
shikimate dehydrogenase (EC:1.1.1.25)
UPI0003D01CC9 related cluster n=1 Tax=unknown RepID=UPI0003D01CC9
SCN18_30_10_14_R2_B_scaffold_15943_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3125..3796
DNA (672bp) protein (224aa)
UPI0003CFD7F8 related cluster n=1 Tax=unknown RepID=UPI0003CFD7F8
TetR family transcriptional regulator {ECO:0000313|EMBL:KKB85193.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
transcriptional regulator, TetR family
Displaying 5 items

View Taxonomy