ggKbase home page

SCN18_30_10_14_R2_B_scaffold_6197

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6197_1
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..664
DNA (663bp) protein (221aa)
UPI0003CEC3FA related cluster n=1 Tax=unknown RepID=UPI0003CEC3FA
Cytochrome C4 {ECO:0000313|EMBL:ESY67340.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
FAD dependent oxidoreductase
SCN18_30_10_14_R2_B_scaffold_6197_2
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1095..1409
DNA (315bp) protein (105aa)
ethyl tert-butyl ether degradation protein EthD n=1 Tax=Rhizobium leguminosarum RepID=UPI000377FD6C
stress responsive alpha-beta barrel EthD-like domain-containing protein
Stress responsive alpha-beta barrel EthD-like domain-containing protein {ECO:0000313|EMBL:AJD45304.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
SCN18_30_10_14_R2_B_scaffold_6197_3
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1479..1958
DNA (480bp) protein (160aa)
Arsenical-resistance protein ACR3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ3_PELHB
arsenical-resistance protein ACR3
Arsenical-resistance protein ACR3 {ECO:0000313|EMBL:AEQ52776.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_30_10_14_R2_B_scaffold_6197_4
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1962..3164
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3V0_OCHA4
major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS15904.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCN18_30_10_14_R2_B_scaffold_6197_5
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3477..4091)
DNA (615bp) protein (205aa)
Transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPG7_NITHX
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABE61880.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R2_B_scaffold_6197_6
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4111..4983)
DNA (873bp) protein (291aa)
PDZ/DHR/GLGF protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPG8_NITHX
hypothetical protein
PDZ/DHR/GLGF protein {ECO:0000313|EMBL:ABE61879.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R2_B_scaffold_6197_7
unknown

Not on your lists

comp(4980..5714)
DNA (735bp) protein (245aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_6197_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5719..6111
DNA (393bp) protein (131aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM58_NITHX
peptidase S1 and S6, chymotrypsin/Hap
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:ABE62689.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R2_B_scaffold_6197_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6197..6583)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6L5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ13103.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_6197_10
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6852..7454)
DNA (603bp) protein (201aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11G24_MESSB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABG63651.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_30_10_14_R2_B_scaffold_6197_11
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7501..7848)
DNA (348bp) protein (116aa)
Cytochrome c, class I n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6I9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX16771.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cytochrome c, class I
SCN18_30_10_14_R2_B_scaffold_6197_12
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7874..8047)
DNA (174bp) protein (58aa)
Putative attachment-related protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N675_9RHIZ
Putative attachment-related protein {ECO:0000313|EMBL:EKF42998.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
putative attachment-related protein
SCN18_30_10_14_R2_B_scaffold_6197_13
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8237..10918
DNA (2682bp) protein (894aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6L0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12700.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_6197_14
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10890..11669)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1A9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53271.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
Displaying 14 items

View Taxonomy