ggKbase home page

SCN18_30_10_14_R2_B_scaffold_6453

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6453_1
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..509
DNA (507bp) protein (169aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium phaseoli RepID=UPI000300D678
Protein ABC transporter protein {ECO:0000313|EMBL:KEC72504.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
type I secretion system ATPase
SCN18_30_10_14_R2_B_scaffold_6453_2
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

516..2045
DNA (1530bp) protein (510aa)
hemolysin secretion protein D n=1 Tax=Ochrobactrum anthropi RepID=UPI0002894347
Hemolysin secretion protein D {ECO:0000313|EMBL:EXL04771.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
type I secretion membrane fusion , HlyD family protein
SCN18_30_10_14_R2_B_scaffold_6453_3
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2074..2853)
DNA (780bp) protein (260aa)
LuxR family transcriptional regulator n=1 Tax=Ochrobactrum anthropi RepID=UPI000289C587
LuxR family transcriptional regulator {ECO:0000313|EMBL:EXL04770.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
bacterial regulatory s, luxR family protein
SCN18_30_10_14_R2_B_scaffold_6453_4
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3421..4329
DNA (909bp) protein (303aa)
Transcriptional regulator, AraC family protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C9N0_ALCDB
araC family transcriptional regulator
Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:AFT68432.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
SCN18_30_10_14_R2_B_scaffold_6453_5
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4476..5837
DNA (1362bp) protein (454aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX37_9GAMM
putative autotransporter protein,putative Ig domain-containing protein
Putative autotransporter protein,putative Ig domain-containing protein {ECO:0000313|EMBL:AGG87399.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 5 items

View Taxonomy