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SCN18_30_10_14_R2_B_scaffold_6484

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6484_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..316)
DNA (315bp) protein (105aa)
Type VI secretion protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FF97_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:ESX71555.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
type VI secretion system lysozyme-related protein
SCN18_30_10_14_R2_B_scaffold_6484_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(362..646)
DNA (285bp) protein (95aa)
Type VI secretion protein n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GPD4_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:ESW92030.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_6484_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(633..1100)
DNA (468bp) protein (156aa)
type VI secretion protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000375C0A9
Uncharacterized protein {ECO:0000313|EMBL:KEC79688.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_6484_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1129..2352)
DNA (1224bp) protein (408aa)
Type VI secretion protein, evpb/vc_a0108 family n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1I0_9RHIZ
Type VI secretion protein, evpb/vc_a0108 family {ECO:0000313|EMBL:EHK53172.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
type VI secretion protein, evpb/vc_a0108 family
SCN18_30_10_14_R2_B_scaffold_6484_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2353..2631)
DNA (279bp) protein (93aa)
EvpB family type VI secretion protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIK9_9RHIZ
EvpB family type VI secretion protein {ECO:0000313|EMBL:ESX71557.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
type VI secretion protein, evpb/vc_a0108 family
SCN18_30_10_14_R2_B_scaffold_6484_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2635..3174)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPG2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06237.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
type VI secretion protein, vc_a0107 family
SCN18_30_10_14_R2_B_scaffold_6484_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3192..4349)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQ33_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06238.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
type VI secretion-associated protein, impa family
SCN18_30_10_14_R2_B_scaffold_6484_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4725..5819
DNA (1095bp) protein (365aa)
UPI0003CFA9C0 related cluster n=1 Tax=unknown RepID=UPI0003CFA9C0
ATPase AAA {ECO:0000313|EMBL:ESZ14629.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
type VI secretion atpase, clpv1 family
Displaying 8 items

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