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SCN18_30_10_14_R2_B_scaffold_3643

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3643_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1325)
DNA (1323bp) protein (441aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4G6_MESOW
Pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AEH87286.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_30_10_14_R2_B_scaffold_3643_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1452..1718
DNA (267bp) protein (89aa)
UPI0003CDFE09 related cluster n=1 Tax=unknown RepID=UPI0003CDFE09
Transcriptional regulator {ECO:0000313|EMBL:ESY65555.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
helix-turn-helix family protein
SCN18_30_10_14_R2_B_scaffold_3643_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1872..2600
DNA (729bp) protein (243aa)
LuxR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037AE9BA
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEH87288.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_30_10_14_R2_B_scaffold_3643_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2668..3291
DNA (624bp) protein (208aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CE70B2 related cluster n=1 Tax=unknown RepID=UPI0003CE70B2
autoinducer synthase
SCN18_30_10_14_R2_B_scaffold_3643_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3392..4084
DNA (693bp) protein (231aa)
Transcriptional regulatory protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98P45_RHILO
Transcriptional regulatory protein {ECO:0000313|EMBL:CDX51969.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulatory protein
SCN18_30_10_14_R2_B_scaffold_3643_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4174..4692
DNA (519bp) protein (173aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JXS0_BURP8
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:EJZ34213.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
pyridoxal-5'-phosphate-dependent protein beta subunit
SCN18_30_10_14_R2_B_scaffold_3643_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4665..5672)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003751ECA
Succinylglutamate desuccinylase {ECO:0000313|EMBL:ESY88192.1}; Flags: Fragment;; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
succinylglutamate desuccinylase/aspartoacylase
SCN18_30_10_14_R2_B_scaffold_3643_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5682..6431)
DNA (750bp) protein (250aa)
UPI0003CF93EF related cluster n=1 Tax=unknown RepID=UPI0003CF93EF
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY65551.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
ABC transporter
SCN18_30_10_14_R2_B_scaffold_3643_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6455..7114)
DNA (660bp) protein (220aa)
ABC transporter n=1 Tax=Rhizobium loti RepID=UPI00035EB71A
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEH87292.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_30_10_14_R2_B_scaffold_3643_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7104..7763)
DNA (660bp) protein (220aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4H3_MESOW
ABC transporter {ECO:0000313|EMBL:CDX51977.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
polar amino acid ABC transporter permease
SCN18_30_10_14_R2_B_scaffold_3643_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7772..8647)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003671A3F
Amino acid ABC transporte {ECO:0000313|EMBL:CDX12018.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ectoine/hydroxyectoine ABC transporter solute-binding protein
SCN18_30_10_14_R2_B_scaffold_3643_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8873..9199)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D74238
Uncharacterized protein {ECO:0000313|EMBL:ESX08967.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
hypothetical protein
Displaying 12 items

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