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SCN18_30_10_14_R2_B_scaffold_5651

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_5651_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..782
DNA (780bp) protein (260aa)
Outer membrane protein, NodT candidate n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98LA8_RHILO
Outer membrane efflux protein BepC {ECO:0000313|EMBL:CDX39986.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
outer membrane protein, nodT
SCN18_30_10_14_R2_B_scaffold_5651_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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973..1599
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037678D2
Uncharacterized protein {ECO:0000313|EMBL:ESY74692.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_5651_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1644..2021
DNA (378bp) protein (126aa)
Phospholipid-binding protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CDA0_9RHIZ
PEBP family protein {ECO:0000313|EMBL:EUB96474.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Phospholipid-binding protein
SCN18_30_10_14_R2_B_scaffold_5651_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2130..5027
DNA (2898bp) protein (966aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Valine--tRNA ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQS0_9RHIZ
valine--tRNA ligase
SCN18_30_10_14_R2_B_scaffold_5651_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5054..6034)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036F658E
Cation transporter {ECO:0000313|EMBL:KKC25392.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
cation diffusion facilitator family transporter
SCN18_30_10_14_R2_B_scaffold_5651_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6109..6813)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ESV3_9RHIZ
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
multiple antibiotic resistance (MarC)-like protein
SCN18_30_10_14_R2_B_scaffold_5651_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7229..7489
DNA (261bp) protein (87aa)
UPI0003CF1F3B related cluster n=1 Tax=unknown RepID=UPI0003CF1F3B
Protein ndvB {ECO:0000313|EMBL:ESW92568.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
glycosyl transferase family protein
Displaying 7 items

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