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SCN18_30_10_14_R2_B_scaffold_8177

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_8177_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1256
DNA (1254bp) protein (418aa)
PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C184DC
Acyl-CoA synthetase {ECO:0000313|EMBL:EHK58376.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
AMP-dependent synthetase and ligase
SCN18_30_10_14_R2_B_scaffold_8177_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1634..2158
DNA (525bp) protein (175aa)
UPI0003CE4792 related cluster n=1 Tax=unknown RepID=UPI0003CE4792
AraC family transcriptional regulator {ECO:0000313|EMBL:ESW81908.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_8177_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2219..2728
DNA (510bp) protein (170aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3A7_9RHIZ
SCN18_30_10_14_R2_B_scaffold_8177_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2799..3050
DNA (252bp) protein (84aa)
Holliday junction resolvase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D144_9RHIZ
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:EDQ34379.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
AbrB family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_8177_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3058..3462
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D142_9RHIZ
DNA-binding protein {ECO:0000313|EMBL:KJS15826.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
DNA-binding protein
SCN18_30_10_14_R2_B_scaffold_8177_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3476..4096
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLH2_9RHIZ
ruvA; Holliday junction DNA helicase RuvA
SCN18_30_10_14_R2_B_scaffold_8177_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4159..4452
DNA (294bp) protein (98aa)
Regulators of stationary/sporulation gene expression protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLH1_9RHIZ
Regulators of stationary/sporulation gene expression protein {ECO:0000313|EMBL:EHK58369.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Looped-hinge helix DNA binding domain, AbrB family
SCN18_30_10_14_R2_B_scaffold_8177_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4449..4841
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLH0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58368.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
PilT protein domain protein
Displaying 8 items

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