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SCN18_30_10_14_R2_B_scaffold_9792

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_9792_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..565
DNA (564bp) protein (188aa)
Transcriptional regulator, MerR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V506_9BRAD
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFI53036.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
DNA-binding transcriptional activator of copper-responsive regulon genes
SCN18_30_10_14_R2_B_scaffold_9792_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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562..1236
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2L7S3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF06331.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_9792_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1363..2112
DNA (750bp) protein (250aa)
Copper-transporting ATPase CopA {ECO:0000313|EMBL:CEG54771.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CEG54771.1};; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V505_9BRAD
SCN18_30_10_14_R2_B_scaffold_9792_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2106..3545
DNA (1440bp) protein (480aa)
Copper-transporting ATPase CopA {ECO:0000313|EMBL:CEG54771.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CEG54771.1};; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
copA; copper-transporting ATPase CopA (EC:3.6.3.4)
Copper-transporting ATPase CopA n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASF3_METEA
SCN18_30_10_14_R2_B_scaffold_9792_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4101..4298)
DNA (198bp) protein (66aa)
SCN18_30_10_14_R2_B_scaffold_9792_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4423..4773
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4J4_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57142.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_9792_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4849..5748
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9D7_9RHIZ
hypothetical protein
UPF0276 protein HYPDE_27308 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_9792_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5699..6388)
DNA (690bp) protein (230aa)
SCN18_30_10_14_R2_B_scaffold_9792_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6630..7154
DNA (525bp) protein (175aa)
DoxX n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B0Z7_9RHIZ
DoxX
DoxX {ECO:0000313|EMBL:AGK57139.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_9792_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7237..7890
DNA (654bp) protein (218aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V466_9BRAD
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFI52746.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
FecI-like sigma-24 factor
SCN18_30_10_14_R2_B_scaffold_9792_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7887..8558
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V465_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52745.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_9792_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8665..9477
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HR95_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56751.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_9792_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9683..10360)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTH2_ACICJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_30_10_14_R2_B_scaffold_9792_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10548..10715)
DNA (168bp) protein (56aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SEY2_9ACTO
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:EFQ82226.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
Displaying 14 items

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