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SCN18_30_10_14_R2_B_scaffold_2432_22

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(17329..18102)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZX3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 249.0
  • Bit_score: 337
  • Evalue 6.60e-90
Hemolysin {ECO:0000313|EMBL:EZQ16954.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 249.0
  • Bit_score: 360
  • Evalue 1.70e-96
putative rRNA methylase similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 251.0
  • Bit_score: 332
  • Evalue 6.00e-89

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGCAGGACCGCCTCGACAATCCCCGCATGCGCCTTGACGAATTGCTCGTCGCACGCGGCTTCTTCGCCAGCCGCTCGCGCGCCCGCGACGCAATCCAGCGTGGAACGGTGCGTGTCGGCGGCAAGGTTGCTGCCAAGGCGGGGGAGGGCGTATCGCCTGACGCCGAAATCTCGGCTGACGATCCGGCGCGGGCCTATGTCTCGCGCGCGGCGCTGAAGCTGAACGCGGCGCTTGACGCTTTCGACCTCGCTCCGGCCAACGCGTACGCGCTCGACCTCGGAGCCTCCACGGGCGGCTTCACGCAGGTTCTTCTGGAGCGCGGCGCGCGCCATGTCACCGCGATCGATGTAGGTCATGGTCAGTTGCATGAACGGATCGCCGCCGATCCGCGAGTTACAAGCATCGAGGGGCTGAACGTCCGCGAACTCAGGGAAAGCGACCTAGGCGGTGTCGCCCCGGATTTCCTCACCGCCGACTTGAGCTTCATTTTGAGCTTCATTTCATTGAGGCTGGCGCTACCGCCTGCCCTTCGTCTGGCCGCGCCCGGCGCGCGGGGCGTCTTCCTCGTCAAGCCGCAATTCGAGGCCGGTCGTGAGGCGATCGGCAAGGGCGGCATCCTGCGCGATCCGGCGGAGGGTGAGCGGATTGCACGGGAATTGCGCCACTGGTTGGACAGCCAGCCGGGCTGGCGCCCCATCGGCCTCGTGCCTTCGCCGATCGAGGGCGGAGACGGCAACCGGGAATATCTGCTGGCCGGGATCAGGGACCGATGA
PROTEIN sequence
Length: 258
MQDRLDNPRMRLDELLVARGFFASRSRARDAIQRGTVRVGGKVAAKAGEGVSPDAEISADDPARAYVSRAALKLNAALDAFDLAPANAYALDLGASTGGFTQVLLERGARHVTAIDVGHGQLHERIAADPRVTSIEGLNVRELRESDLGGVAPDFLTADLSFILSFISLRLALPPALRLAAPGARGVFLVKPQFEAGREAIGKGGILRDPAEGERIARELRHWLDSQPGWRPIGLVPSPIEGGDGNREYLLAGIRDR*