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SCN18_30_10_14_R2_B_scaffold_2432

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2432_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..947
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036ADDE6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB47233.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_30_10_14_R2_B_scaffold_2432_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(967..1311)
DNA (345bp) protein (115aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I001_9RHIZ
SCN18_30_10_14_R2_B_scaffold_2432_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1355..2320)
DNA (966bp) protein (322aa)
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
homoserine kinase n=1 Tax=Ochrobactrum anthropi RepID=UPI00028A3A2C
SCN18_30_10_14_R2_B_scaffold_2432_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2326..3333)
DNA (1008bp) protein (336aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N6S0_9RHIZ
SCN18_30_10_14_R2_B_scaffold_2432_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3477..4244)
DNA (768bp) protein (256aa)
UPI0003CE0DFC related cluster n=1 Tax=unknown RepID=UPI0003CE0DFC
Uncharacterized protein {ECO:0000313|EMBL:CDX46054.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2432_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4247..4630)
DNA (384bp) protein (128aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRA9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX18254.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2432_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4749..5516)
DNA (768bp) protein (256aa)
Cytochrome c oxidase subunit III n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MCH6_9RHIZ
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EKF19871.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
cytochrome C oxidase subunit III
SCN18_30_10_14_R2_B_scaffold_2432_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5549..6154)
DNA (606bp) protein (202aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZZ2_9RHIZ
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cytochrome C oxidase assembly protein CtaG/Cox11
SCN18_30_10_14_R2_B_scaffold_2432_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6160..6315)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FF32CC
Uncharacterized protein {ECO:0000313|EMBL:CDX42067.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2432_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6312..7250)
DNA (939bp) protein (313aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Protoheme IX farnesyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZZ0_9RHIZ
protoheme IX farnesyltransferase
SCN18_30_10_14_R2_B_scaffold_2432_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7324..8970)
DNA (1647bp) protein (549aa)
cytochrome C oxidase subunit I n=1 Tax=Hoeflea sp. 108 RepID=UPI00036CAF14
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EIM72884.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
cytochrome c oxidase subunit I type
SCN18_30_10_14_R2_B_scaffold_2432_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9009..9878)
DNA (870bp) protein (290aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
UPI0003D03CC2 related cluster n=1 Tax=unknown RepID=UPI0003D03CC2
cytochrome C oxidase subunit II
SCN18_30_10_14_R2_B_scaffold_2432_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10257..10823
DNA (567bp) protein (189aa)
Invasion associated locus B n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KD5_MESSB
Invasion associated locus B {ECO:0000313|EMBL:EZQ16949.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
invasion associated locus B
SCN18_30_10_14_R2_B_scaffold_2432_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10835..10972)
DNA (138bp) protein (46aa)
SCN18_30_10_14_R2_B_scaffold_2432_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11068..12483
DNA (1416bp) protein (472aa)
UPI0003CFE9E5 related cluster n=1 Tax=unknown RepID=UPI0003CFE9E5
Peptidase C69 {ECO:0000313|EMBL:ESZ51505.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
peptidase U62 modulator of DNA gyrase
SCN18_30_10_14_R2_B_scaffold_2432_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12705..13523
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037CF289
Glutamine transporter subunit periplasmic binding component of ABC superfamily {ECO:0000313|EMBL:CDX62294.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
family 3 extracellular solute-binding protein
SCN18_30_10_14_R2_B_scaffold_2432_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13668..14336
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035CFF55
Putative transporter subunit: permease component of ABC superfamily transporter {ECO:0000313|EMBL:CDX19928.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_30_10_14_R2_B_scaffold_2432_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14323..15045
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036B584A
Putative transporter subunit: ATP-binding component of ABC superfamily transporter {ECO:0000313|EMBL:CDX62296.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter
SCN18_30_10_14_R2_B_scaffold_2432_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15111..15644)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003103EB1
Uncharacterized protein {ECO:0000313|EMBL:CDX28858.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2432_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15637..16008)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZY1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53734.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2432_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16091..17332)
DNA (1242bp) protein (414aa)
RNA methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRF1_9RHIZ
RNA methyltransferase {ECO:0000313|EMBL:EXL10177.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase
SCN18_30_10_14_R2_B_scaffold_2432_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17329..18102)
DNA (774bp) protein (258aa)
RNA-binding S4 domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZX3_9RHIZ
Hemolysin {ECO:0000313|EMBL:EZQ16954.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
putative rRNA methylase
Displaying 22 items

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