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SCN18_30_10_14_R2_B_scaffold_3453_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1255..1833

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I8S9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 190.0
  • Bit_score: 240
  • Evalue 1.40e-60
HTH-type transcriptional regulator MtrR {ECO:0000313|EMBL:CEJ12969.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 192.0
  • Bit_score: 284
  • Evalue 9.10e-74
putative transcriptional regulatory protein TetR family similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 190.0
  • Bit_score: 227
  • Evalue 2.00e-57

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Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGGGAACCGCAACCGAGAAGACAAGACGCAAGCCGCGTGCGGATTCAATCCGCAACCGGGAGATCCTGCTCGAGGCGGCTACGCAGATCTTCAGCGCCGGAGGTCCGCAGGCGAGCCTGGAGGCGGTCGCCCGGAAGGCGGGCGTCGGGATCGGTACGCTCTATCGGCATTTCCCGACGCGCGAAGCGCTGTTCGAGGCCGTCTATCGTCACGAAGTCGACCATCTCGTCGAACTGGCGGGAAAGCTCGCCGGCGAGCCCGATCCGGTCGAGGCGCTGCGCCAATGGCTGCATGCGAATGTCCGGCTTGTCGCGGCCAAGAAAGGCATGATCGGTGCGCTGCAACTCGTCGCGCATGGCTCCCCGGACCTGAAAGCCTATTCCTTCGAGCAGCTGACCGGCGCGGTCCGCTTGCTGCTCGATCGCGCGATCGCGGCCGGGGAAGCACGTTCCGACATTCCGCCGGAAGACCTTCTGCGCACCTTGATCGGCATCTTCTATTCGCAAAGCACGGCCGACTGGCAGCCTACCGCCCTCCGCCTCGTCGACATCTTCGTCGACGGGTTGCGCCGGCGCTGA
PROTEIN sequence
Length: 193
MGTATEKTRRKPRADSIRNREILLEAATQIFSAGGPQASLEAVARKAGVGIGTLYRHFPTREALFEAVYRHEVDHLVELAGKLAGEPDPVEALRQWLHANVRLVAAKKGMIGALQLVAHGSPDLKAYSFEQLTGAVRLLLDRAIAAGEARSDIPPEDLLRTLIGIFYSQSTADWQPTALRLVDIFVDGLRRR*