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SCN18_30_10_14_R2_B_scaffold_3453

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3453_1
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..546)
DNA (546bp) protein (182aa)
Xanthine dehydrogenase n=2 Tax=Methylobacterium extorquens RepID=H1KE45_METEX
Molybdopterin dehydrogenase {ECO:0000313|EMBL:KEQ08366.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
oxidoreductase, FAD-binding subunit; molybdopterin oxidoreductase, xanthine dehydrogenase family
SCN18_30_10_14_R2_B_scaffold_3453_2
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(543..1055)
DNA (513bp) protein (171aa)
oxidoreductase with iron-sulfur subunit (EC:1.2.99.2)
Aldehyde oxidoreductase (Molybdenum iron sulfurprotein) n=1 Tax=Citreicella sp. SE45 RepID=D0DCY0_9RHOB
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:CEJ12968.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_30_10_14_R2_B_scaffold_3453_3
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1255..1833
DNA (579bp) protein (193aa)
50S ribosomal protein L21 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I8S9_9BRAD
HTH-type transcriptional regulator MtrR {ECO:0000313|EMBL:CEJ12969.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative transcriptional regulatory protein TetR family
SCN18_30_10_14_R2_B_scaffold_3453_4
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1866..2660)
DNA (795bp) protein (265aa)
Pca regulon regulatory protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFD2_9RHIZ
Pca regulon regulatory protein {ECO:0000313|EMBL:CCV10724.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family
SCN18_30_10_14_R2_B_scaffold_3453_5
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2725..3444
DNA (720bp) protein (240aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.6)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003042BA9
3-oxoadipate CoA-transferase {ECO:0000313|EMBL:EXL09330.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCN18_30_10_14_R2_B_scaffold_3453_6
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3441..4112
DNA (672bp) protein (224aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
3-oxoadipate CoA-transferase beta subunit {ECO:0000313|EMBL:ABL73081.1}; EC=2.8.3.8 {ECO:0000313|EMBL:ABL73081.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
3-oxoadipate CoA-transferase subunit B n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F470BB
SCN18_30_10_14_R2_B_scaffold_3453_7
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4114..5319
DNA (1206bp) protein (402aa)
acetyl-CoA acetyltransferase n=1 Tax=Rhizobium loti RepID=UPI000378E1A5
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:AID33211.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
beta-ketoadipyl CoA thiolase
SCN18_30_10_14_R2_B_scaffold_3453_8
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5332..5703)
DNA (372bp) protein (124aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EVQ1_9RHIZ
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCV03756.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
SCN18_30_10_14_R2_B_scaffold_3453_9
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5642..6280)
DNA (639bp) protein (213aa)
AraC family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN31_9RHIZ
AraC family transcriptional regulator {ECO:0000313|EMBL:EHK57825.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
SCN18_30_10_14_R2_B_scaffold_3453_10
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6358..7281
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN32_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57826.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3453_11
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7292..8356
DNA (1065bp) protein (355aa)
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
L-carnitine dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN34_9RHIZ
3-hydroxyacyl-CoA dehydrogenase
SCN18_30_10_14_R2_B_scaffold_3453_12
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8370..9533
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CCV09933.1}; EC=1.3.8.- {ECO:0000313|EMBL:CCV09933.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003634C98
acyl-CoA dehydrogenase
SCN18_30_10_14_R2_B_scaffold_3453_13
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9530..11719
DNA (2190bp) protein (730aa)
CoA-binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN36_9RHIZ
CoA-binding domain-containing protein {ECO:0000313|EMBL:EHK57830.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acyl-CoA synthetase (NDP forming)
SCN18_30_10_14_R2_B_scaffold_3453_14
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11712..12494
DNA (783bp) protein (261aa)
Carnitinyl-CoA dehydratase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN37_9RHIZ
Carnitinyl-CoA dehydratase {ECO:0000313|EMBL:EHK57831.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
enoyl-CoA hydratase/isomerase
SCN18_30_10_14_R2_B_scaffold_3453_15
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12494..13438
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F0R9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV09936.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
alpha/beta hydrolase fold-3 domain-containing protein
SCN18_30_10_14_R2_B_scaffold_3453_16
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13445..14254)
DNA (810bp) protein (270aa)
Xanthine dehydrogenase accessory protein XdhC n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN53_9RHIZ
Xanthine dehydrogenase accessory protein XdhC {ECO:0000313|EMBL:EHK57847.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3453_17
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14285..15319)
DNA (1035bp) protein (345aa)
xanthine dehydrogenase, molybdopterin binding subunit (EC:1.17.1.4)
Xanthine dehydrogenase, molybdopterin binding subunit {ECO:0000313|EMBL:AEH84847.1}; EC=1.17.1.4 {ECO:0000313|EMBL:AEH84847.1};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Xanthine dehydrogenase, molybdopterin binding subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y1L9_MESOW
Displaying 17 items

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