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2019_SCN_bioreactor_t1_biofilm_scaffold_141287

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_1
unknown

Not on your lists

1..162
DNA (162bp) protein (54aa)

This feature has no annotations

2019_SCN_bioreactor_t1_biofilm_scaffold_141287_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(220..1647)
DNA (1428bp) protein (476aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Adenosylhomocysteinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ56_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_3
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(1669..2889)
DNA (1221bp) protein (407aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
S-adenosylmethionine synthase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ57_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

3035..4177
DNA (1143bp) protein (381aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ58_OPITP
response regulator receiver sensor signal transduction histidine kinase
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACB77130.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4174..4569
DNA (396bp) protein (132aa)
Response regulator receiver protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ59_OPITP
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACB77131.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4566..4757
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ60_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77132.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4738..6444
DNA (1707bp) protein (569aa)
Type II secretion system protein E n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ61_OPITP
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ACB77133.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

6464..6826
DNA (363bp) protein (121aa)
Hpt protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ62_OPITP
Hpt protein
Hpt protein {ECO:0000313|EMBL:ACB77134.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(6883..8985)
DNA (2103bp) protein (701aa)
Glycosyl transferase family 2 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ63_OPITP
glucosyltransferase MdoH
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACB77135.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9007..9540)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ64_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77136.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_11
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9665..11131)
DNA (1467bp) protein (489aa)
Periplasmic glucan biosynthesis protein MdoG n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ65_OPITP
mdoD; glucan biosynthesis protein D
Periplasmic glucan biosynthesis protein MdoG {ECO:0000313|EMBL:ACB77137.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11167..12108)
DNA (942bp) protein (314aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ66_OPITP
phage SPO1 DNA polymerase-like protein
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ACB77138.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_13
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(12112..12711)
DNA (600bp) protein (200aa)
Riboflavin synthase, alpha subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ67_OPITP
riboflavin synthase subunit alpha
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AKC82037.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(12718..14100)
DNA (1383bp) protein (461aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ68_OPITP
PDZ/DHR/GLGF domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:ACB77140.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_15
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(14097..15443)
DNA (1347bp) protein (449aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ69_OPITP
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ACB77141.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists


15462..18029
DNA (2568bp) protein (856aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Leucine--tRNA ligase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ70_OPITP
leucyl-tRNA synthetase
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_17
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18069..18977
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ71_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77143.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_18
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18977..20146
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ72_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_19
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

20150..20773
DNA (624bp) protein (208aa)
Polysaccharide export protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ73_OPITP
polysaccharide export protein
Polysaccharide export protein {ECO:0000313|EMBL:ACB77145.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_20
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

20781..22940
DNA (2160bp) protein (720aa)
exopolysaccharide tyrosine-protein kinase (EC:2.7.10.2)
Capsular exopolysaccharide family {ECO:0000313|EMBL:ACB77146.1}; EC=2.7.10.2 {ECO:0000313|EMBL:ACB77146.1};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Capsular exopolysaccharide family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ74_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_21
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

22997..23839
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ75_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77147.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_22
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

23884..24369
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ76_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77148.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_23
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

24378..25457
DNA (1080bp) protein (360aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
tRNA-dihydrouridine synthase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IXG5_9BACT
dihydrouridine synthase
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_24
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25497..26036)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ78_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77150.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_25
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(26045..27844)
DNA (1800bp) protein (600aa)
Signal peptide peptidase SppA, 67K type n=2 Tax=unclassified Opitutaceae RepID=H1J0W8_9BACT
signal peptidase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_26
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

27951..29429
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ATB4_9BACT
nicotinamide mononucleotide adenylyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EIP98255.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_27
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

29440..30300
DNA (861bp) protein (287aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Diaminopimelate epimerase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ82_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_28
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(30376..30996)
DNA (621bp) protein (207aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ84_OPITP
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AKC82149.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_29
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

31020..32771
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ87_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77159.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_141287_30
unknown

Not on your lists

32864..33448
DNA (585bp) protein (195aa)

This feature has no annotations

Displaying items 1-30 of 142 in total

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